RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 CCKARP32238 428 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 SLC6A9P48067 706 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 PRLHRP49683 370 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 FKBP1BP68106 108 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 EXOSC7Q15024 291 aaKnown RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 P2RY6Q15077 328 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 OR1N1Q8NGS0 311 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 RPUSD4Q96CM3 377 aaKnown RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 GINS3Q9BRX5 216 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 SLC17A5Q9NRA2 495 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 PPIAL4AQ9Y536 164 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 NXPH3O95157 252 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF735P0CB33 412 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF823P16415 610 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 MRPL58Q14197 206 aaKnown RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF596Q8TC21 504 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 CHST11Q9NPF2 352 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 FOXD3Q9UJU5 478 aaPredicted RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 B3GALT5Q9Y2C3 310 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 EMC9Q9Y3B6 208 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 MRPS18BQ9Y676 258 aaKnown RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 IGLV3-16A0A075B6K0 115 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 APBB3O95704 486 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 HMGA1P17096 107 aaKnown RBP12.49□□□□□ -0.41
DUSP28-202ENST00000405954 SCAND1P57086 179 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 TESK1Q15569 626 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 FAM103A1Q9BTL3 118 aaKnown RBP12.49□□□□□ -0.41
DUSP28-202ENST00000405954 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 RNF186Q9NXI6 227 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 SPACA6W5XKT8 324 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 A0A087WUJ7 227 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 LCATP04180 440 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 GUSBP08236 651 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 HLA-GP17693 338 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 HNRNPA3P51991 378 aaKnown RBP12.49□□□□□ -0.41
DUSP28-202ENST00000405954 CCL20P78556 96 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 TMEM268Q5VZI3 342 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 DPY19L2P2Q6ZN68 376 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 TRBV11-1A0A0K0K1C0 115 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 IL2RAP01589 272 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF136P52737 540 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 KRTDAPP60985 99 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF266Q14584 549 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 TRMT12Q53H54 448 aaKnown RBP12.49□□□□□ -0.41
DUSP28-202ENST00000405954 SLC18B1Q6NT16 456 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 C5orf24Q7Z6I8 188 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 RNF128Q8TEB7 428 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 SMIM7Q9BQ49 75 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 VN1R3Q9BXE9 311 aa12.49□□□□□ -0.41
DUSP28-202ENST00000405954 DUSP15Q9H1R2 295 aaPredicted RBP12.49□□□□□ -0.41
DUSP28-202ENST00000405954 HEATR5BQ9P2D3 2071 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 HPNP05981 417 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 OR5G3P0C626 314 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF708P17019 499 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 MFGE8Q08431 387 aaPredicted RBP12.48□□□□□ -0.41
DUSP28-202ENST00000405954 GAGE1Q13065 139 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 PDGFRLQ15198 375 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF793Q6ZN11 406 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 Q6ZN92 141 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 ERASQ7Z444 233 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 CXorf40AQ8TE69 158 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 CYB5D2Q8WUJ1 264 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 CORO2AQ92828 525 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 FGGYQ96C11 551 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 C4orf45Q96LM5 186 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 ZPBPQ9BS86 351 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 HELZP42694 1942 aaKnown RBP12.48□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF850A8MQ14 1090 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 H7C4K7 107 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 CST7O76096 145 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 CSTAP01040 98 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 GABRR1P24046 479 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 ACAA2P42765 397 aaKnown RBP12.48□□□□□ -0.41
DUSP28-202ENST00000405954 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
DUSP28-202ENST00000405954 HIKESHIQ53FT3 197 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 FAM78AQ5JUQ0 283 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
DUSP28-202ENST00000405954 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 TIMP2P16035 220 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 SLC37A1P57057 533 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 SP3Q02447 781 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 NOGQ13253 232 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
DUSP28-202ENST00000405954 OR5D18Q8NGL1 313 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 P2RY10O00398 339 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 LATO43561 262 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 LDB3O75112 727 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 PDGFBP01127 241 aaPredicted RBP12.47□□□□□ -0.41
DUSP28-202ENST00000405954 HBE1P02100 147 aa12.47□□□□□ -0.41
DUSP28-202ENST00000405954 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms