RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR10R2Q8NGX6 335 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 WNT2BQ93097 391 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 NPAS1Q99742 590 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 AMDHD2Q9Y303 409 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 PLXNA2O75051 1894 aa7.99□□□□□ -1.13
LIG4-202ENST00000405925 TRAV8-7A0A075B6U6 113 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 PIGBOS1A0A0B4J2F0 54 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CYTIPO60759 359 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 NEURL1O76050 574 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ZNF728P0DKX0 622 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 PTBP1P26599 531 aaKnown RBP eCLIP7.98□□□□□ -1.13
LIG4-202ENST00000405925 GSK3AP49840 483 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CAV2P51636 162 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 GUCA2AQ02747 115 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 FBXW12Q6X9E4 464 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 FAM122BQ7Z309 247 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 PRSS35Q8N3Z0 413 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 TECTBQ96PL2 329 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 FAM234AQ9H0X4 552 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 RANBP3Q9H6Z4 567 aaPredicted RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 CYSLTR2Q9NS75 346 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ZNF224Q9NZL3 707 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 KLK11Q9UBX7 282 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 OR5V1Q9UGF6 321 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 PFDN2Q9UHV9 154 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 MEX3AA1L020 520 aaKnown RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 TEX46H3BTG2 121 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ATXN7O15265 892 aaPredicted RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 TNFRSF1AP19438 455 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 OR3A4PP47883 348 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 MECP2P51608 486 aaKnown RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 SNRPD2P62316 118 aaKnown RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 BCL2A1Q16548 175 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 RIPPLY2Q5TAB7 128 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 LAIR2Q6ISS4 152 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 INO80CQ6PI98 192 aaPredicted RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 SCCPDHQ8NBX0 429 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ASB5Q8WWX0 329 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 KIRREL1Q96J84 757 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 UQCC2Q9BRT2 126 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ESRP2Q9H6T0 727 aaKnown RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 CNTD2Q9H8S5 307 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CYB5R1Q9UHQ9 305 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 F5H5P2 479 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ARPC5O15511 151 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CD3EP07766 207 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CSF3P09919 207 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 DCTDP32321 178 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CEBPGP53567 150 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 LINC01590Q5TEZ4 76 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 TMEM91Q6ZNR0 172 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 GABRG1Q8N1C3 465 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 OR10AD1Q8NGE0 317 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 OR6K3Q8NGY3 331 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 OR1S1Q8NH92 325 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 SRRQ9GZT4 340 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 TINAGQ9UJW2 476 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 XRCC3O43542 346 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CD3DP04234 171 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 KIR2DL3P43628 341 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CYCSP99999 105 aaKnown RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 P2RY6Q15077 328 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 BAK1Q16611 211 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ZFP62Q8NB50 900 aaPredicted RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 KLHDC3Q9BQ90 382 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 SLC25A21Q9BQT8 299 aaPredicted RBP7.98□□□□□ -1.13
LIG4-202ENST00000405925 KCNK15Q9H427 330 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 PLK3Q9H4B4 646 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 NECAP2Q9NVZ3 263 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 CLDN16Q9Y5I7 305 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 KCNMB2Q9Y691 235 aa7.98□□□□□ -1.13
LIG4-202ENST00000405925 ESPL1Q14674 2120 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 AKR7A2O43488 359 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 TTRP02766 147 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 HOXD4P09016 255 aaPredicted RBP7.97□□□□□ -1.13
LIG4-202ENST00000405925 FGL1Q08830 312 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 ACSM1Q08AH1 577 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 CATR1Q13166 79 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 UBALD1Q8TB05 177 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 SLC25A40Q8TBP6 338 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 AKIP1Q9NQ31 210 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 ST6GALNAC2Q9UJ37 374 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 NUP50Q9UKX7 468 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 LIPGQ9Y5X9 500 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 ALG5Q9Y673 324 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 LHFPL6Q9Y693 200 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 TERTO14746 1132 aaKnown RBP7.97□□□□□ -1.13
LIG4-202ENST00000405925 IFNA7P01567 189 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 GSTP1P09211 210 aaKnown RBP7.97□□□□□ -1.13
LIG4-202ENST00000405925 FREM3P0C091 2139 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 RPA2P15927 270 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 MST1P26927 711 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 AGTR1P30556 359 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 HLXQ14774 488 aaPredicted RBP7.97□□□□□ -1.13
LIG4-202ENST00000405925 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 CCDC190Q86UF4 302 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 GRPEL2Q8TAA5 225 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms