RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 STARD10Q9Y365 291 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 OR14I1A6ND48 311 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 GFRA3O60609 400 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 RAB3DO95716 219 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 APLNRP35414 380 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 ZFP69Q49AA0 526 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 MOB3CQ70IA8 216 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF75AQ96N20 296 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 KCNN3Q9UGI6 736 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF107Q9UII5 783 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF736B4DX44 427 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 RAD51DO75771 328 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 TGFBR3Q03167 851 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 MALLQ13021 153 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 HLXQ14774 488 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 RBMS2Q15434 407 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 FCN2Q15485 313 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 KCNJ8Q15842 424 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 PLEKHN1Q494U1 663 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 VWA1Q6PCB0 445 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 Q6ZT83 130 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 LHFPL2Q6ZUX7 228 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 GVQW1Q8N7I0 195 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 OR4S1Q8NGB4 309 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 DACT3Q96B18 629 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 CPNE2Q96FN4 548 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 DKK4Q9UBT3 224 aa17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 ANKRD11Q6UB99 2663 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-205ENST00000380180 M0QYG6 137 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 SPRY1O43609 319 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 ANGPTL7O43827 346 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 SSX5O60225 188 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 LYZL6O75951 148 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 HPXP02790 462 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 GSTP1P09211 210 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 HIST1H1DP16402 221 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 ZBTB37Q5TC79 503 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 PLCXD3Q63HM9 321 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 STEAP2Q8NFT2 490 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 ARHGAP5-AS1Q96IT6 56 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 GINS4Q9BRT9 223 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 TINAGL1Q9GZM7 467 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 ING3Q9NXR8 418 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 LHX6Q9UPM6 363 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 SLC7A11Q9UPY5 501 aa17.15■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF850A8MQ14 1090 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 PLATP00750 562 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 CD74P04233 296 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 SERPINA5P05154 406 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 FUT6P51993 359 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 FOXF2Q12947 444 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 OR2A2Q6IF42 318 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 MRPL21Q7Z2W9 205 aaKnown RBP17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 TCTE3Q8IZS6 198 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 OR56B2PQ8NGI1 322 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 CYYR1Q96J86 154 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 PTTG3PQ9NZH4 202 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 LUZP4Q9P127 313 aa17.14■□□□□ 0.34
PDLIM5-205ENST00000380180 ESPL1Q14674 2120 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 A0A1W2PR80 420 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 PYCARD-AS1I3L0S3 204 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 PRAF2O60831 178 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 WNT5AP41221 380 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 RAD52P43351 418 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 NSUN5P2Q63ZY6 315 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 SPACA3Q8IXA5 215 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 SLC30A7Q8NEW0 376 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 TECTBQ96PL2 329 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 TM2D1Q9BX74 207 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 METTL9Q9H1A3 318 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 POFUT1Q9H488 388 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 NPDC1Q9NQX5 325 aaPredicted RBP17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 WASF3Q9UPY6 502 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 DMXL2Q8TDJ6 3036 aa17.14■□□□□ 0.33
PDLIM5-205ENST00000380180 FOXI3A8MTJ6 420 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 MKRN2OSH3BPM6 223 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 CNOT4O95628 575 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 ANXA7P20073 488 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 EIF2S3P41091 472 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 ATP1B3P54709 279 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 GNG2P59768 71 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 RSU1Q15404 277 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 GABRA6Q16445 453 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 CD276Q5ZPR3 534 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 RPUSD3Q6P087 351 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 OR11H7Q8NGC8 314 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 OR6K3Q8NGY3 331 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 IFT46Q9NQC8 304 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 A0A1B0GUH1 482 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 MFNGO00587 321 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 HTR3BO95264 441 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 AMY2AP04746 511 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 ZNF735P0CB33 412 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 BLVRBP30043 206 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 MECP2P51608 486 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 PRR14LQ5THK1 2151 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 OR52W1Q6IF63 320 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 ASCL4Q6XD76 172 aa17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 GLDNQ6ZMI3 551 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-205ENST00000380180 WBP1Q96G27 269 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms