RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SIRT7Q9NRC8 400 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 LTBP2Q14767 1821 aa13.84□□□□□ -0.19
CSNK1A1-202ENST00000377843 A0A087WZY1 265 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 PRSS37A4D1T9 235 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 RBFOX3A6NFN3 312 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 C17orf51A8MQB3 221 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 MBPP02686 304 aaPredicted RBP13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 CEACAM5P06731 702 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 HIST1H1DP16402 221 aaKnown RBP13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 CXCR1P25024 350 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 RND3P61587 244 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 C1orf140Q5VVS0 124 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 CA13Q8N1Q1 262 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 METTL9Q9H1A3 318 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 STARD5Q9NSY2 213 aa13.83□□□□□ -0.19
CSNK1A1-202ENST00000377843 TRPM6Q9BX84 2022 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 CDRT15L2A8MXV6 281 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 GEMIN2O14893 280 aaKnown RBP13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 MPIG6BO95866 241 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 ISG15P05161 165 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 AMY2BP19961 511 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 HSD11B1P28845 292 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 GLIPR1P48060 266 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 POMZP3Q6PJE2 187 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 LANCL3Q6ZV70 420 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 LINC00346Q8IVM7 164 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 CYB561D1Q8N8Q1 229 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 BEND2Q8NDZ0 799 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 OR13D1Q8NGV5 346 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 FNDC9Q8TBE3 224 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 STRAPQ9Y3F4 350 aaKnown RBP13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 MMACHCQ9Y4U1 282 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 TRIOO75962 3097 aa13.83□□□□□ -0.2
CSNK1A1-202ENST00000377843 EDDM13A0A1B0GTR0 161 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 MARCH11A6NNE9 402 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 XKRYO14609 159 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 DIRAS3O95661 229 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 AMBPP02760 352 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 GIMD1P0DJR0 217 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 PNMTP11086 282 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 FGF7P21781 194 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 ACKR1Q16570 336 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 ZNF429Q86V71 674 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 SLC22A24Q8N4F4 322 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 RHBDD1Q8TEB9 315 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 ARHGAP5-AS1Q96IT6 56 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 TIMM29Q9BSF4 260 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 TWSG1Q9GZX9 223 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 B3GALT5Q9Y2C3 310 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 A8MVM7 634 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 H0YGG7 62 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 NSA2O95478 260 aaKnown RBP13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 PVRP15151 417 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 ARF3P61204 181 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 ACY1Q03154 408 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 PDGFRLQ15198 375 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 C12orf76Q8N812 135 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 WFIKKN2Q8TEU8 576 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 FAM210BQ96KR6 192 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 C1orf147Q96MC9 270 aaPredicted RBP13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 C1orf123Q9NWV4 160 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 EHFQ9NZC4 300 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 LIPGQ9Y5X9 500 aa13.82□□□□□ -0.2
CSNK1A1-202ENST00000377843 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 CA3P07451 260 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 SLC35E2P0CK97 266 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 PCP4P48539 62 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 RGS19P49795 217 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 AFF3P51826 1226 aaKnown RBP13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 LILRA6Q6PI73 481 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 ZNF519Q8TB69 540 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 KIR3DX1Q9H7L2 352 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 FAM86C1Q9NVL1 165 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 COA3Q9Y2R0 106 aaPredicted RBP13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 CACNA1IQ9P0X4 2223 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 BORCS7-ASMTA0A0B4J1R7 106 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 MBP02144 154 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 GUSBP08236 651 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 DRD3P35462 400 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 RBMXP38159 391 aaKnown RBP13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 ZNF117Q03924 483 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 TMEM176BQ3YBM2 270 aaPredicted RBP13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 GLIPR1L1Q6UWM5 242 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 TBC1D29Q9UFV1 150 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 SRPK3Q9UPE1 567 aa13.81□□□□□ -0.2
CSNK1A1-202ENST00000377843 CTSBP07858 339 aa13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 ZNF25P17030 456 aaPredicted RBP13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 RAB38P57729 211 aa13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 FNDC7Q5VTL7 733 aa13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 DCXRQ7Z4W1 244 aa13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 LFNGQ8NES3 379 aa13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 METTL21AQ8WXB1 218 aa13.8□□□□□ -0.2
CSNK1A1-202ENST00000377843 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms