RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CHRFAM7AQ494W8 412 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 PRSS58Q8IYP2 241 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 DDIT4LQ96D03 193 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 PARP12Q9H0J9 701 aaKnown RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 SERINC1Q9NRX5 453 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 CYP8B1Q9UNU6 501 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 PCDH15Q96QU1 1955 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 HPNP05981 417 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 ANOS1P23352 680 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 ACY1Q03154 408 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 GALNTL5Q7Z4T8 443 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 PECRQ9BY49 303 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 MRPL13Q9BYD1 178 aaKnown RBP18.61■□□□□ 0.57
UPF3A-202ENST00000375299 ALKBH4Q9NXW9 302 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 GHRLQ9UBU3 117 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 LSM5Q9Y4Y9 91 aaKnown RBP18.61■□□□□ 0.57
UPF3A-202ENST00000375299 M0R036 132 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 RAB5AP20339 215 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 CCL1P22362 96 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 THEM4Q5T1C6 240 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 SCRT1Q9BWW7 348 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 CHRNA10Q9GZZ6 450 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 UCK1Q9HA47 277 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 SPACA1Q9HBV2 294 aa18.61■□□□□ 0.57
UPF3A-202ENST00000375299 IGKV1-9A0A0C4DH69 117 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 H3BMH7 237 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 NME2P1O60361 137 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 UCP2P55851 309 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 DOK3Q7L591 496 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 MVB12AQ96EY5 273 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 ARV1Q9H2C2 271 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 SLC2A4RGQ9NR83 387 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 MIOXQ9UGB7 285 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 SUSD2Q9UGT4 822 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 VDAC3Q9Y277 283 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 A0A1W2PNV4 684 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 LIPT2A6NK58 231 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 BLVRBP30043 206 aaPredicted RBP18.6■□□□□ 0.57
UPF3A-202ENST00000375299 ECI1P42126 302 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 LBX1P52954 281 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 CLRN1P58418 232 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 SGPP2Q8IWX5 399 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 ERGIC1Q969X5 290 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 KLHDC7BQ96G42 594 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 PLEKHA2Q9HB19 425 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 B3GAT1Q9P2W7 334 aa18.6■□□□□ 0.57
UPF3A-202ENST00000375299 H3BML4 177 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 IFNA21P01568 189 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 OR8U8P0C7N1 319 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 DAOP14920 347 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 S100PP25815 95 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 FOXF1Q12946 379 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 GGNBP1Q5YKI7 109 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 MRPL24Q96A35 216 aaKnown RBP18.59■□□□□ 0.57
UPF3A-202ENST00000375299 C20orf24Q9BUV8 137 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 DUSP15Q9H1R2 295 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-202ENST00000375299 ADAMTS9Q9P2N4 1935 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 hCG_1809904A0A1W2PP81 198 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 A0A1W2PR64 198 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 A0A1W2PRV1 198 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 DANCRP0C864 163 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 FBLP22087 321 aaKnown RBP18.59■□□□□ 0.57
UPF3A-202ENST00000375299 GABREP78334 506 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 ZNF616Q08AN1 781 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 SULF2Q8IWU5 870 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 NOXO1Q8NFA2 376 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 SEMA6DQ8NFY4 1073 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 OR5D18Q8NGL1 313 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 SHDQ96IW2 340 aa18.59■□□□□ 0.57
UPF3A-202ENST00000375299 SERPINE3A8MV23 424 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 SCGB1D2O95969 90 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 IGLV3-19P01714 112 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 CTSDP07339 412 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-202ENST00000375299 SEC11BP0C7V7 166 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 CDAP32320 146 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 C17orf67Q0P5P2 114 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 C1QL2Q7Z5L3 287 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 TCTEX1D2Q8WW35 142 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 MALSU1Q96EH3 234 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 EIF5A2Q9GZV4 153 aaKnown RBP18.58■□□□□ 0.56
UPF3A-202ENST00000375299 RAB33BQ9H082 229 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 ZNF701Q9NV72 531 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-202ENST00000375299 TINAGQ9UJW2 476 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 EXPH5Q8NEV8 1989 aa18.58■□□□□ 0.56
UPF3A-202ENST00000375299 CRYM-AS1A6NIL9 109 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 CLN5O75503 358 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 PRF1P14222 555 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 LCN10Q6JVE6 187 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 C16orf47Q6ZP98 133 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-202ENST00000375299 FAM57BQ71RH2 274 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 OR14K1Q8NGZ2 314 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 ZNF2Q9BSG1 426 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-202ENST00000375299 LUZP4Q9P127 313 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 IGKV1D-8A0A087WSZ0 117 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 VSTM2BA6NLU5 285 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 TXNL1O43396 289 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 NQO2P16083 231 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 STARD6P59095 220 aa18.57■□□□□ 0.56
UPF3A-202ENST00000375299 KISS1Q15726 138 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms