RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 GATSQ8NAP1 163 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 TIMM29Q9BSF4 260 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 ABHD14AQ9BUJ0 271 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 ABHD6Q9BV23 337 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 C1orf123Q9NWV4 160 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 OSGIN2Q9Y236 505 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 SOCS1O15524 211 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 RAD51DO75771 328 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 SCAF4O95104 1147 aaKnown RBP18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 GPR75O95800 540 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 TDGF1P3P51864 188 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 EGR4Q05215 589 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 ZNF141Q15928 474 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 TMEM183AQ8IXX5 376 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 CYB561D1Q8N8Q1 229 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 MRPL24Q96A35 216 aaKnown RBP18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 FGGYQ96C11 551 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 RCC1LQ96I51 464 aaKnown RBP18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 FTCDNL1E5RQL4 147 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 CTSVO60911 334 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 CEACAM5P06731 702 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 SLC35G6P0C7Q6 338 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 SMIM10L1P0DMW3 83 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 RBMXP38159 391 aaKnown RBP18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 PPM1FP49593 454 aaPredicted RBP18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 FBXO42Q6P3S6 717 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 RNF144BQ7Z419 303 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 CTHRC1Q96CG8 243 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 KTI12Q96EK9 354 aaPredicted RBP18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 SMIM10Q96HG1 83 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 CBLN4Q9NTU7 201 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 MRPS2Q9Y399 296 aaKnown RBP18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 LIPGQ9Y5X9 500 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 CHD9Q3L8U1 2897 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 M0R143 59 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 P2RY10O00398 339 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 BPNT1O95861 308 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 PNLIPP16233 465 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 BTG2P78543 158 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 KCTD18Q6PI47 426 aaPredicted RBP18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 CARFQ8N187 725 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 SHDQ96IW2 340 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 IL17BQ9UHF5 180 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 ANAPC10Q9UM13 185 aa18.18■□□□□ 0.5
TMEFF1-201ENST00000374879 MYO15AQ9UKN7 3530 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 NSA2O95478 260 aaKnown RBP18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 GNALP38405 381 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 DTD1Q8TEA8 209 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 LIPHQ8WWY8 451 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 ST6GALNAC5Q9BVH7 336 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 C11orf98E9PRG8 122 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 TOX3O15405 576 aaPredicted RBP18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 XRCC2O43543 280 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 PGA3P0DJD8 388 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 AMY2BP19961 511 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 FUT3P21217 361 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 PSRC1Q6PGN9 363 aaPredicted RBP18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 SPSB3Q6PJ21 355 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 THNSL2Q86YJ6 484 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 SGPP2Q8IWX5 399 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 C1orf87Q8N0U7 546 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 NT5CQ8TCD5 201 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 BADQ92934 168 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 NIPSNAP3BQ9BS92 247 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 LPAR5Q9H1C0 372 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 G6PC2Q9NQR9 355 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 CYP8B1Q9UNU6 501 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 B3GALT5Q9Y2C3 310 aa18.17■□□□□ 0.5
TMEFF1-201ENST00000374879 SERINC4A6NH21 518 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 CDRT15L2A8MXV6 281 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 SLC16A7O60669 478 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 SRSF10O75494 262 aaKnown RBP18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 MBPP02686 304 aaPredicted RBP18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 OR3A2P47893 321 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 SGCGQ13326 291 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 TCEA2Q15560 299 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 C5orf34Q96MH7 638 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 OR52A1Q9UKL2 312 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 MTCH2Q9Y6C9 303 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 R4GMQ9 66 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 E5RGE8 158 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 FOXS1O43638 330 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 OR4A8P0C604 315 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 ASCL1P50553 236 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 HNRNPKP61978 463 aaKnown RBP eCLIP18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 RPS15AP62244 130 aaKnown RBP18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 TANGO2Q6ICL3 276 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 ATG4DQ86TL0 474 aaPredicted RBP18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 ZNF524Q96C55 264 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 ADGRG7Q96K78 797 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 CERS4Q9HA82 394 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 NSG2Q9Y328 171 aa18.16■□□□□ 0.5
TMEFF1-201ENST00000374879 A6NNC1 897 aa18.15■□□□□ 0.5
TMEFF1-201ENST00000374879 MPZL1O95297 269 aa18.15■□□□□ 0.5
TMEFF1-201ENST00000374879 POU2F2P09086 479 aa18.15■□□□□ 0.5
TMEFF1-201ENST00000374879 CCR4P51679 360 aa18.15■□□□□ 0.5
TMEFF1-201ENST00000374879 RUNX3Q13761 415 aa18.15■□□□□ 0.5
TMEFF1-201ENST00000374879 HNF4GQ14541 408 aa18.15■□□□□ 0.5
TMEFF1-201ENST00000374879 TMEM176BQ3YBM2 270 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms