RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 TMEM9BQ9NQ34 198 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 H3BVH4 76 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 MASP2O00187 686 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 PGA4P0DJD7 388 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 PGA5P0DJD9 388 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 FUT3P21217 361 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 SUMO3P55854 103 aaPredicted RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 PMP22Q01453 160 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 C6orf15Q6UXA7 325 aaPredicted RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 THOC3Q96J01 351 aaKnown RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 SLC7A10Q9NS82 523 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 OR2B11Q5JQS5 317 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 FGF20Q9NP95 211 aaPredicted RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 IL13RA2Q14627 380 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 DHRS13Q6UX07 377 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 PLPP1O14494 284 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 ZNF749O43361 778 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 GPANK1O95872 356 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 RASL12Q9NYN1 266 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 IGSF23A1L1A6 192 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
TPR-201ENST00000367478 ISLRO14498 428 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 OR2T10Q8NGZ9 312 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 DUSP21Q9H596 190 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 Q6ZSR9 355 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 WASHC3Q9Y3C0 194 aa11.23□□□□□ -0.61
TPR-201ENST00000367478 OR2G2Q8NGZ5 317 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 ZNF552Q9H707 407 aaPredicted RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 ANXA10Q9UJ72 324 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 CORTO00230 105 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 RBP4P02753 201 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 PRRX1P54821 245 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SPRED3Q2MJR0 410 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SLC25A26Q70HW3 274 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 PDPNQ86YL7 162 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 OR2J1Q9GZK6 312 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 FBXO4Q9UKT5 387 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 HMGN4O00479 90 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SLC17A2O00624 439 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 OR6S1Q8NH40 331 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 MAGT1Q9H0U3 335 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 ICAM5Q9UMF0 924 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 NPPBP16860 134 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 RELBQ01201 579 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 ZNF816Q0VGE8 651 aaPredicted RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 HMSDA8MTL9 139 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 M0R3E3 92 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 MBTPS2O43462 519 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 PPICP45877 212 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 RGS7BPQ6MZT1 257 aaPredicted RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 MOB3BQ86TA1 216 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 PRRX2Q99811 253 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 HAND1O96004 215 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SULT1A1P50225 295 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 ZNF121P58317 390 aaPredicted RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 RPL18Q07020 188 aaKnown RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 NHLRC1Q6VVB1 395 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SPICQ8N5J4 248 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 VN1R2Q8NFZ6 395 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 SIRT7Q9NRC8 400 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 CA3P07451 260 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 PKIAP61925 76 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 FUNDC1Q8IVP5 155 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 OR4D10Q8NGI6 311 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SCMH1Q96GD3 660 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 SLC46A2Q9BY10 475 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 MYOZ1Q9NP98 299 aaPredicted RBP11.22□□□□□ -0.61
TPR-201ENST00000367478 HCFC1R1Q9NWW0 138 aa11.22□□□□□ -0.61
TPR-201ENST00000367478 CEACAM3P40198 252 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 GNG3P63215 75 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 YBX1P67809 324 aaKnown RBP11.21□□□□□ -0.61
TPR-201ENST00000367478 ZNF260Q3ZCT1 412 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 ELFN2Q5R3F8 820 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 ADPRHL1Q8NDY3 354 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 NACAE9PAV3 2078 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 B2MP61769 119 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 GPR87Q9BY21 358 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 SLC2A10O95528 541 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 OR10J1P30954 320 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 FABP5Q01469 135 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 SLC38A11Q08AI6 406 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 EMC6Q9BV81 110 aa11.21□□□□□ -0.61
TPR-201ENST00000367478 HINT3Q9NQE9 182 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms