RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ANKRD34CP0C6C1 535 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 SSX2Q16385 188 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF721Q8TF20 911 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 RBMXL1Q96E39 390 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 SHPKQ9UHJ6 478 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TRIP11Q15643 1979 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 SCAF4O95104 1147 aaKnown RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TBPP20226 339 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 SLC25A35Q3KQZ1 300 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 OR13G1Q8NGZ3 307 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 TMEM230Q96A57 120 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 DOK1Q99704 481 aa10.3□□□□□ -0.76
SYNE1-204ENST00000367248 MYOZ1Q9NP98 299 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-204ENST00000367248 C16orf97H3BN30 126 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 FUT3P21217 361 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 CD96P40200 585 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 HIKESHIQ53FT3 197 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 ADAM5Q6NVV9 412 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 C20orf196Q8IYI0 205 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 CSRP2Q16527 193 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 NUFIP2Q7Z417 695 aaKnown RBP10.29□□□□□ -0.76
SYNE1-204ENST00000367248 Q8IYB0 196 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 COMMD5Q9GZQ3 224 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 ADGRL4Q9HBW9 690 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 ERRFI1Q9UJM3 462 aaPredicted RBP10.29□□□□□ -0.76
SYNE1-204ENST00000367248 PLXNB2O15031 1838 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 IGHV3-43A0A0B4J1X8 118 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 A0A1B0GVG6 124 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 SERPINE3A8MV23 424 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 DHRS3O75911 302 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 GOSR1O95249 250 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 CD3DP04234 171 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 IGHV3-43DP0DP04 118 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 FGF5P12034 268 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 PPP1CBP62140 327 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 OPCMLQ14982 345 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF529Q6P280 563 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 Q6ZNX1 250 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 CMTM2Q8TAZ6 248 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 ANKRD33BA6NCL7 494 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 FCGR2CP31995 323 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 COL19A1Q14993 1142 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 DGAT2L6Q6ZPD8 337 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 C17orf47Q8NEP4 570 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 KCNIP2Q9NS61 270 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 A0A1W2PQM1 296 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 SULT1C2O00338 296 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 SERPINF1P36955 418 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
SYNE1-204ENST00000367248 OR4D11Q8NGI4 311 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 PAQR8Q8TEZ7 354 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 AQP7P3A6NL99 342 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 HAX1O00165 279 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 DNPH1O43598 174 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 OR5G3P0C626 314 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 OR10J4P0C629 311 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 NKX2-1P43699 371 aaPredicted RBP10.29□□□□□ -0.76
SYNE1-204ENST00000367248 OR2M3Q8NG83 312 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 DDA1Q9BW61 102 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 TTTY12Q9BZ98 90 aa10.29□□□□□ -0.76
SYNE1-204ENST00000367248 OPN3Q9H1Y3 402 aaPredicted RBP10.29□□□□□ -0.76
SYNE1-204ENST00000367248 DOCK5Q9H7D0 1870 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 AKR7A2O43488 359 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 CD276Q5ZPR3 534 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF436Q9C0F3 470 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-204ENST00000367248 KRBOX4Q5JUW0 171 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 C10orf111Q8N326 155 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 UCN2Q96RP3 112 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 FOXJ2Q9P0K8 574 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 A8MXE2 369 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 PPP3CBP16298 524 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 PI3P19957 117 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 HTD2P86397 168 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 TAGLNQ01995 201 aaKnown RBP10.28□□□□□ -0.76
SYNE1-204ENST00000367248 NAAAQ02083 359 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF266Q14584 549 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 SLC23A3Q6PIS1 610 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 PCGF1Q9BSM1 259 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 SAP30LQ9HAJ7 183 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 FFAR1O14842 300 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 HNF1AP20823 631 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 CSF2RBP32927 897 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 LY6DQ14210 128 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 DPF1Q92782 380 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-204ENST00000367248 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-204ENST00000367248 FAM186AA6NE01 2351 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 OIP5O43482 229 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 MPZL1O95297 269 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF14P17017 642 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-204ENST00000367248 HABP2Q14520 560 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-204ENST00000367248 MESTQ5EB52 335 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 C17orf78Q8N4C9 275 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 SMIM4Q8WVI0 70 aa10.28□□□□□ -0.76
SYNE1-204ENST00000367248 NPAP1Q9NZP6 1156 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms