RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MYOZ3Q8TDC0 251 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ANGPTL4Q9BY76 406 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ICAM5Q9UMF0 924 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ZFP30Q9Y2G7 519 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 MAP1LC3B2A6NCE7 125 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 CORTO00230 105 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 HAND1O96004 215 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 CAMPP49913 170 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 RAG2P55895 527 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 DHRS4L2Q6PKH6 230 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 BATF2Q8N1L9 274 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM251Q8N6I4 163 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TM4SF18Q96CE8 201 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM208Q9BTX3 173 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TEX101Q9BY14 249 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 MAP1LC3BQ9GZQ8 125 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 SH2D2AQ9NP31 389 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ING1Q9UK53 422 aaPredicted RBP8.4□□□□□ -1.06
VPS13A-203ENST00000360280 SLCO2B1O94956 709 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 CAMKMTQ7Z624 323 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 OR10A7Q8NGE5 316 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 PRSS21Q9Y6M0 314 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 PRSS37A4D1T9 235 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 SIAH2O43255 324 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 GZMKP49863 264 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 DIO1P49895 249 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 CDK5R1Q15078 307 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 HEATR1Q9H583 2144 aaKnown RBP8.4□□□□□ -1.06
VPS13A-203ENST00000360280 LRP6O75581 1613 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 HMGN4O00479 90 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 MBPP02686 304 aaPredicted RBP8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TXNRD2Q9NNW7 524 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TAAR3PQ9P1P4 343 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 GLI4P10075 376 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 DCTDP32321 178 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 ASTLQ6HA08 431 aaPredicted RBP8.4□□□□□ -1.06
VPS13A-203ENST00000360280 WDR31Q8NA23 367 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 RDH5Q92781 318 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM30CPA0ZSE6 113 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 IGSF23A1L1A6 192 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 GPX5O75715 221 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 FUT6P51993 359 aa8.4□□□□□ -1.06
VPS13A-203ENST00000360280 CST7O76096 145 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 CD82P27701 267 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 PPP2CBP62714 309 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 OR52B4Q8NGK2 314 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF426Q9BUY5 554 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 AUNIPQ9H7T9 357 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 HS3ST2Q9Y278 367 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 ALOX12BO75342 701 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 PGA4P0DJD7 388 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 PGA5P0DJD9 388 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 DUSP8Q13202 625 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 FZD2Q14332 565 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 PAAF1Q9BRP4 392 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 PBOV1Q9GZY1 135 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 CRYAAP02489 173 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 CD226Q15762 336 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 ADAT3Q96EY9 351 aaPredicted RBP8.4□□□□□ -1.07
VPS13A-203ENST00000360280 OR4C46A6NHA9 309 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 ACAA1P09110 424 aaPredicted RBP8.4□□□□□ -1.07
VPS13A-203ENST00000360280 RELBQ01201 579 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 RNF167Q9H6Y7 350 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 NAA60Q9H7X0 242 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 TRAPPC4Q9Y296 219 aa8.4□□□□□ -1.07
VPS13A-203ENST00000360280 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 SMIM18P0DKX4 95 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 DUSP18Q8NEJ0 188 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 SUCLG1P53597 346 aaKnown RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 RIGQ13278 110 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 PELI3Q8N2H9 469 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 ADPRHL1Q8NDY3 354 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 OR5M1Q8NGP8 315 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 SRD5A3Q9H8P0 318 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 TIAL1Q01085 375 aaKnown RBP eCLIP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 MOGAT1Q96PD6 335 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 LPAR3Q9UBY5 353 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 ADIPOQQ15848 244 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 RBPMS2Q6ZRY4 209 aaKnown RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 FOXJ3Q9UPW0 622 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 RPS4Y1P22090 263 aaKnown RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 FAM71E1Q6IPT2 247 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 LINC00696Q6ZRV3 163 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 CARFQ8N187 725 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 FAM24BQ8N5W8 94 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 HDAC8Q9BY41 377 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 AKIP1Q9NQ31 210 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 PRRX2Q99811 253 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 PLPP1O14494 284 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 SNAI1O95863 264 aaPredicted RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 POLR2IP36954 125 aaKnown RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 SPNS3Q6ZMD2 512 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 KLF16Q9BXK1 252 aaPredicted RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 ACER3Q9NUN7 267 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 AMMECR1Q9Y4X0 333 aaPredicted RBP8.39□□□□□ -1.07
VPS13A-203ENST00000360280 CRYBG1Q9Y4K1 1723 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 SLC25A19Q9HC21 320 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 RASL12Q9NYN1 266 aa8.39□□□□□ -1.07
VPS13A-203ENST00000360280 GP1BAP07359 652 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms