RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GLB1LQ6UWU2 654 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 LINC01551Q86U37 167 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 MAML2Q8IZL2 1156 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 CNRIP1Q96F85 164 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 IFNL4K9M1U5 179 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 ATXN7O15265 892 aaPredicted RBP13.93□□□□□ -0.18
RTN3-205ENST00000356000 PNPP00491 289 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 S100A7P31151 101 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 PLA2G5P39877 138 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 UCP3P55916 312 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 CLDN6P56747 220 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 HIST1H3AP68431 136 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 FBXW12Q6X9E4 464 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 TGIF2LYQ8IUE0 185 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 OR10G4Q8NGN3 311 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 GPR119Q8TDV5 335 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 RTBDNQ9BSG5 229 aaPredicted RBP13.93□□□□□ -0.18
RTN3-205ENST00000356000 CTDSP1Q9GZU7 261 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 RBKSQ9H477 322 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 APOBEC3BQ9UH17 382 aaKnown RBP13.93□□□□□ -0.18
RTN3-205ENST00000356000 A0A0A6YYD5 115 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 CTSHP09668 335 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 WNT5AP41221 380 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 ZFP36L1Q07352 338 aaKnown RBP13.93□□□□□ -0.18
RTN3-205ENST00000356000 PRDX4Q13162 271 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 NFATC4Q14934 902 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 PRAMEF14Q5SWL7 426 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 TEX43Q6ZNM6 134 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 ADAMTS15Q8TE58 950 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 GRHL3Q8TE85 626 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 FGGYQ96C11 551 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 ZNF514Q96K75 400 aaPredicted RBP13.93□□□□□ -0.18
RTN3-205ENST00000356000 SERGEFQ9UGK8 458 aa13.93□□□□□ -0.18
RTN3-205ENST00000356000 EML5Q05BV3 1969 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 NDUFS4O43181 175 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 CTSAP10619 480 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 LAMP2P13473 410 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 FPR2P25090 351 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 LHFPL4Q7Z7J7 247 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 OR2D3Q8NGH3 330 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 ZCCHC14Q8WYQ9 949 aaKnown RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 TNFRSF14Q92956 283 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 ALG14Q96F25 216 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 C4orf45Q96LM5 186 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 WWTR1Q9GZV5 400 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 IKZF2Q9UKS7 526 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 FIGNL2A6NMB9 653 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 RPL4P36578 427 aaKnown RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 TMEM225Q6GV28 225 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 RTL6Q6ICC9 239 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 PLXDC2Q6UX71 529 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 LRP11Q86VZ4 500 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
RTN3-205ENST00000356000 CGGBP1Q9UFW8 167 aaPredicted RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 RCL1Q9Y2P8 373 aaKnown RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 LSM5Q9Y4Y9 91 aaKnown RBP13.92□□□□□ -0.18
RTN3-205ENST00000356000 ENTPD2Q9Y5L3 495 aa13.92□□□□□ -0.18
RTN3-205ENST00000356000 PFN1P07737 140 aaKnown RBP13.91□□□□□ -0.18
RTN3-205ENST00000356000 PI3P19957 117 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 IGFBP4P22692 258 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
RTN3-205ENST00000356000 STPG4Q8N801 248 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 SCAMP4Q969E2 229 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 SDSLQ96GA7 329 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 IGSF21Q96ID5 467 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 SCGB3A2Q96PL1 93 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 E5RGE8 158 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 GPR137BO60478 399 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 YPEL1O60688 119 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 NGFRP08138 427 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 COL9A1P20849 921 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 PSEN2P49810 448 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 WDR38Q5JTN6 314 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 MRPL2Q5T653 305 aaKnown RBP13.91□□□□□ -0.18
RTN3-205ENST00000356000 TMEM184AQ6ZMB5 413 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 GRINAQ7Z429 371 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 CDC20BQ86Y33 519 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 CSNK1A1LQ8N752 337 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 DCAF4L2Q8NA75 395 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 SLC16A11Q8NCK7 471 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 YPEL2Q96QA6 119 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 NSG2Q9Y328 171 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 RNF115Q9Y4L5 304 aa13.91□□□□□ -0.18
RTN3-205ENST00000356000 VWA8A3KMH1 1905 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 KNG1P01042 644 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 C8orf89P0DMQ9 161 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 RPS4Y1P22090 263 aaKnown RBP13.9□□□□□ -0.18
RTN3-205ENST00000356000 PRLHRP49683 370 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 GNB2P62879 340 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 VAX1Q5SQQ9 334 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 ZNF761Q86XN6 746 aaPredicted RBP13.9□□□□□ -0.18
RTN3-205ENST00000356000 CMTM1Q8IZ96 169 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 GLYATL1Q969I3 302 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 MOB3AQ96BX8 217 aa13.9□□□□□ -0.18
RTN3-205ENST00000356000 LDB3O75112 727 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms