RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ACOXLQ9NUZ1 547 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 CLN8Q9UBY8 286 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 OR5V1Q9UGF6 321 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 PIGLQ9Y2B2 252 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 EXOGQ9Y2C4 368 aaKnown RBP12.69□□□□□ -0.38
PRKN-201ENST00000338468 DOCK11Q5JSL3 2073 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 IGHV2-70DA0A0C4DH43 119 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 A0A1B0GW55 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 C22orf46C9J442 243 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 ANKRD65E5RJM6 399 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 ADAM20O43506 726 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 TCF21O43680 179 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L2P0CJ85 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L3P0CJ86 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L4P0CJ87 422 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L5P0CJ88 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L6P0CJ89 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L7P0CJ90 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 EPHA1P21709 976 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 KIR3DL2P43630 455 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 KCNJ8Q15842 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4L9Q6RFH8 374 aaPredicted RBP12.68□□□□□ -0.38
PRKN-201ENST00000338468 OR10Z1Q8NGY1 313 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 NANPQ8TBE9 248 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 APH1BQ8WW43 257 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 STMN2Q93045 179 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 LGALS12Q96DT0 336 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 WDR13Q9H1Z4 485 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 DUX4Q9UBX2 424 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 ENPP5Q9UJA9 477 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
PRKN-201ENST00000338468 KIR2DS1A0A191URI9 304 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 A6NIN4 97 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 ZNF732B4DXR9 585 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 SPRY1O43609 319 aaPredicted RBP12.67□□□□□ -0.38
PRKN-201ENST00000338468 NDUFA2O43678 99 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 RHBDL1O75783 438 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 VENTXO95231 258 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 GNG3P63215 75 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 WDR38Q5JTN6 314 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 KCTD8Q6ZWB6 473 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 MOB3CQ70IA8 216 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 THAP5Q7Z6K1 395 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 FGFRL1Q8N441 504 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 TEX29Q8N6K0 151 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 OR5A2Q8NGI9 324 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 ZNF649Q9BS31 505 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 TRIM36Q9NQ86 728 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 KAAG1Q9UBP8 84 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 GNG8Q9UK08 70 aa12.67□□□□□ -0.38
PRKN-201ENST00000338468 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 H3BSH0 61 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 AKR7A2O43488 359 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 MTRF1O75570 445 aaKnown RBP12.66□□□□□ -0.38
PRKN-201ENST00000338468 NRASP01111 189 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 DBTP11182 482 aaKnown RBP12.66□□□□□ -0.38
PRKN-201ENST00000338468 MUC1P15941 1255 aaPredicted RBP12.66□□□□□ -0.38
PRKN-201ENST00000338468 NPY4RP50391 375 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 OR12D2P58182 307 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 ACTC1P68032 377 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 ACTA1P68133 377 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 RCN1Q15293 331 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 MICBQ29980 383 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 LPCAT4Q643R3 524 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 STUMQ69YW2 141 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 C12orf54Q6X4T0 127 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 DOK3Q7L591 496 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 AQP3Q92482 292 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 HIST1H2AAQ96QV6 131 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 CCL13Q99616 98 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 NUDT16L1Q9BRJ7 211 aaKnown RBP12.66□□□□□ -0.38
PRKN-201ENST00000338468 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 AMBNQ9NP70 447 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 GPR173Q9NS66 373 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 SMPD3Q9NY59 655 aaPredicted RBP12.66□□□□□ -0.38
PRKN-201ENST00000338468 ERVK-18Q9QC07 812 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 MYRFQ9Y2G1 1151 aa12.66□□□□□ -0.38
PRKN-201ENST00000338468 MEGF8Q7Z7M0 2845 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 DAPL1A0PJW8 107 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 OR5B21A6NL26 309 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 DVL1O14640 695 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 MPZL2O60487 215 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 WBP4O75554 376 aaKnown RBP12.65□□□□□ -0.38
PRKN-201ENST00000338468 RGS9O75916 674 aaPredicted RBP12.65□□□□□ -0.38
PRKN-201ENST00000338468 TFF1P04155 84 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 PEX2P28328 305 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
PRKN-201ENST00000338468 GMFBP60983 142 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 LRRC36Q1X8D7 754 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 CLVS2Q5SYC1 327 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 ATPAF1Q5TC12 328 aaPredicted RBP12.65□□□□□ -0.38
PRKN-201ENST00000338468 FDX2Q6P4F2 183 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms