RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SFT2D1Q8WV19 159 aa11.56□□□□□ -0.56
VSTM4-202ENST00000332853 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
VSTM4-202ENST00000332853 UNC13CQ8NB66 2214 aa11.56□□□□□ -0.56
VSTM4-202ENST00000332853 GMDSO60547 372 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 NDUFB6O95139 128 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 CTXN2P0C2S0 81 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 NKX6-1P78426 367 aaPredicted RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 DRAM2Q6UX65 266 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 TCTE3Q8IZS6 198 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 RTN4IP1Q8WWV3 396 aaPredicted RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 GHRLQ9UBU3 117 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 RPS10-NUDT3A0A1W2PQS6 291 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 CD96P40200 585 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 RPS10P46783 165 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 TSEN54Q7Z6J9 526 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 OR6X1Q8NH79 312 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 EXTL1Q92935 676 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 YIPF5Q969M3 257 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 PTP4A3O75365 173 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 EIF3IQ13347 325 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 NHLRC1Q6VVB1 395 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 AQP8O94778 261 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 RGS11O94810 467 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 HIST1H1DP16402 221 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 ZNF680Q8NEM1 530 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 PFDN5Q99471 154 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 ADAT1Q9BUB4 502 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 MTFP1Q9UDX5 166 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 SIP14410 1827 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 GPR12P47775 334 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 SLC25A30Q5SVS4 291 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 MUC20Q8N307 709 aaPredicted RBP11.55□□□□□ -0.56
VSTM4-202ENST00000332853 IER2Q9BTL4 223 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 TMEM74BQ9NUR3 256 aa11.55□□□□□ -0.56
VSTM4-202ENST00000332853 TRAV8-7A0A075B6U6 113 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 HPP00738 406 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 PDGFBP01127 241 aaPredicted RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 HPNP05981 417 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ZNF83P51522 516 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 RAB11AP62491 216 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 INPP5JQ15735 1006 aaPredicted RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 PNLIPRP3Q17RR3 467 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ZFP62Q8NB50 900 aaPredicted RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 SLC30A7Q8NEW0 376 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 OR2M3Q8NG83 312 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 UQCC2Q9BRT2 126 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 TBPP20226 339 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 GPX8Q8TED1 209 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 FBXW5Q969U6 566 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 SERPINE3A8MV23 424 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 SOX8P57073 446 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 SNTB1Q13884 538 aaKnown RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 HES1Q14469 280 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 RGS7BPQ6MZT1 257 aaPredicted RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 CRIPAKQ8N1N5 446 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 OR2Z1Q8NG97 314 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ABHD3Q8WU67 409 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 CMTM3Q96MX0 182 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 EGLN1Q9GZT9 426 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 KCNE5Q9UJ90 142 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ALX3O95076 343 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 HTD2P86397 168 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 PRDX4Q13162 271 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 PMS2CLQ68D20 193 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 TUSC5Q8IXB3 177 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ZNF354AO60765 605 aaPredicted RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 RNPS1Q15287 305 aaKnown RBP11.54□□□□□ -0.56
VSTM4-202ENST00000332853 MRGPREQ86SM8 312 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 SBF1O95248 1867 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 ANKRD36A6QL64 1941 aa11.54□□□□□ -0.56
VSTM4-202ENST00000332853 A8MXE2 369 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 ZNHIT1O43257 154 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 TAS2R30P59541 319 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 RPS23P62266 143 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 SSBP1Q04837 148 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 TOR2AQ5JU69 321 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 GFRALQ6UXV0 394 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 CSF2RBP32927 897 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 LIMK1P53667 647 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 DEGS2Q6QHC5 323 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 ZNF355PQ9NSJ1 428 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 PRR13Q9NZ81 148 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 LINC01387J3KSC0 135 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
VSTM4-202ENST00000332853 CBR1P16152 277 aa11.53□□□□□ -0.56
VSTM4-202ENST00000332853 ASCL1P50553 236 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms