RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 COL13A1Q5TAT6 717 aaPredicted RBP21.53■■□□□ 1.04
SOX1-201ENST00000330949 APCDD1LQ8NCL9 501 aa21.53■■□□□ 1.04
SOX1-201ENST00000330949 CCL4L1Q8NHW4 92 aa21.53■■□□□ 1.04
SOX1-201ENST00000330949 POM121Q96HA1 1249 aa21.53■■□□□ 1.04
SOX1-201ENST00000330949 LPAR5Q9H1C0 372 aa21.53■■□□□ 1.04
SOX1-201ENST00000330949 TCFL5Q9UL49 500 aa21.53■■□□□ 1.04
SOX1-201ENST00000330949 PDGFRLQ15198 375 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 OR10G6Q8NH81 332 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 SPACA7Q96KW9 195 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 SH3BGRL3Q9H299 93 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 IL23AQ9NPF7 189 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 PITPNC1Q9UKF7 332 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 ARID1BQ8NFD5 2236 aaPredicted RBP21.52■■□□□ 1.04
SOX1-201ENST00000330949 IGLV1-36A0A0B4J1U3 117 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 A8MVM7 634 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 HSD17B6O14756 317 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 SCGB1D2O95969 90 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 CEACAM5P06731 702 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 GJA4P35212 333 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 APOBEC1P41238 236 aaKnown RBP21.52■■□□□ 1.04
SOX1-201ENST00000330949 TAS2R46P59540 309 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 NNATQ16517 81 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 GPR157Q5UAW9 335 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 CYB5R2Q6BCY4 276 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 SGPP2Q8IWX5 399 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 TVP23CQ96ET8 276 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 WFDC1Q9HC57 220 aa21.52■■□□□ 1.04
SOX1-201ENST00000330949 A0A1W2PQU0 124 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 PRR19A6NJB7 356 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 H0Y8X5 98 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 P2RY10O00398 339 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 PLAC9Q5JTB6 97 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 TMEM31Q5JXX7 168 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 ZNF429Q86V71 674 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 ZNF664Q8N3J9 261 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 GATSQ8NAP1 163 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 RNASEH2CQ8TDP1 164 aaKnown RBP21.51■■□□□ 1.03
SOX1-201ENST00000330949 TAAR8Q969N4 342 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 DDA1Q9BW61 102 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 CCDC187A0A096LP49 1063 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 C11orf98E9PRG8 122 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 K7N7A8 449 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 GPR137BO60478 399 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 HNRNPA1P09651 372 aaKnown RBP eCLIP21.51■■□□□ 1.03
SOX1-201ENST00000330949 NUBP1P53384 320 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 HNF4GQ14541 408 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 NIPSNAP3BQ9BS92 247 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 GZMBP10144 247 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 PTGER4P35408 488 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 C1orf140Q5VVS0 124 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 CA13Q8N1Q1 262 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 BCORP1Q8N888 145 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 HSD17B11Q8NBQ5 300 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 BSCL2Q96G97 398 aaPredicted RBP21.51■■□□□ 1.03
SOX1-201ENST00000330949 FAM210BQ96KR6 192 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 IGFLR1Q9H665 355 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 FGF22Q9HCT0 170 aa21.51■■□□□ 1.03
SOX1-201ENST00000330949 TMEM182Q6ZP80 229 aaPredicted RBP21.5■■□□□ 1.03
SOX1-201ENST00000330949 C1orf87Q8N0U7 546 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 ARHGEF39Q8N4T4 335 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 ARL6IP6Q8N6S5 226 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 PLPP5Q8NEB5 264 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 RERGQ96A58 199 aaPredicted RBP21.5■■□□□ 1.03
SOX1-201ENST00000330949 ACTR3CQ9C0K3 210 aaPredicted RBP21.5■■□□□ 1.03
SOX1-201ENST00000330949 EHFQ9NZC4 300 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 TBC1D29Q9UFV1 150 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 CACNA1IQ9P0X4 2223 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 FREM3P0C091 2139 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 H0YL77 283 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 OR5H8P0DN80 308 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 INSM1Q01101 510 aaPredicted RBP21.5■■□□□ 1.03
SOX1-201ENST00000330949 SLC10A1Q14973 349 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 OR8G5Q8NG78 346 aa21.5■■□□□ 1.03
SOX1-201ENST00000330949 LINC01553A4QN01 128 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 FTCDNL1E5RQL4 147 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 SDCBPO00560 298 aaPredicted RBP21.49■■□□□ 1.03
SOX1-201ENST00000330949 SOCS1O15524 211 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 MBP02144 154 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 CTLA4P16410 223 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 CEBPGP53567 150 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 RPL27P61353 136 aaKnown RBP21.49■■□□□ 1.03
SOX1-201ENST00000330949 GLO1Q04760 184 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 ARFRP1Q13795 201 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 SRPK3Q9UPE1 567 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 A0A0A6YYD4 124 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 ZNF93P35789 620 aaPredicted RBP21.49■■□□□ 1.03
SOX1-201ENST00000330949 RGS19P49795 217 aa21.49■■□□□ 1.03
SOX1-201ENST00000330949 RCC1LQ96I51 464 aaKnown RBP21.49■■□□□ 1.03
SOX1-201ENST00000330949 VSX1Q9NZR4 365 aaPredicted RBP21.49■■□□□ 1.03
SOX1-201ENST00000330949 MED19A0JLT2 244 aaPredicted RBP21.48■■□□□ 1.03
SOX1-201ENST00000330949 MPIG6BO95866 241 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 SRP19P09132 144 aaKnown RBP21.48■■□□□ 1.03
SOX1-201ENST00000330949 KLK2P20151 261 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 G0S2P27469 103 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 CSNK2A1P68400 391 aaPredicted RBP21.48■■□□□ 1.03
SOX1-201ENST00000330949 FAM189A2Q15884 450 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 GALNTL5Q7Z4T8 443 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 SLC35E3Q7Z769 313 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 CSNK2A3Q8NEV1 391 aa21.48■■□□□ 1.03
SOX1-201ENST00000330949 OR5D14Q8NGL3 314 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms