RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CCDC92Q53HC0 331 aaPredicted RBP11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 SFRP4Q6FHJ7 346 aaPredicted RBP11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 CORO6Q6QEF8 472 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 CMTM4Q8IZR5 234 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 OR5AU1Q8NGC0 362 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 OR9Q1Q8NGQ5 310 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 OR6K6Q8NGW6 343 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 OR11L1Q8NGX0 322 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 OR4Q3Q8NH05 313 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 Q8TCH9 128 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 C17orf50Q8WW18 174 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 PTP4A1Q93096 173 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 PAPOLBQ9NRJ5 636 aaKnown RBP11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 CYB5R1Q9UHQ9 305 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 LHFPL6Q9Y693 200 aa11.94□□□□□ -0.5
CTHRC1-201ENST00000330295 PRR23D1E9PI22 279 aaPredicted RBP11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 G3V2T6 193 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 MLNRO43193 412 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 RAMP3O60896 148 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 PRR23D2P0DMB1 279 aaPredicted RBP11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 PRKACGP22612 351 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 BMXP51813 675 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 TPTEP56180 551 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 HIST1H3AP68431 136 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 MALLQ13021 153 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 AANATQ16613 207 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 HIST2H3PS2Q5TEC6 136 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 OTPQ5XKR4 325 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 SLC18B1Q6NT16 456 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 HIST2H3AQ71DI3 136 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 TMEM179BQ7Z7N9 219 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 LINC00346Q8IVM7 164 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 SLCO4A1Q96BD0 722 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 ATF6BQ99941 703 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 HCAR1Q9BXC0 346 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 STARD10Q9Y365 291 aa11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
CTHRC1-201ENST00000330295 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 TVP23AA6NH52 213 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 F5H5K5 113 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 LGALS8O00214 317 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 ZNF593O00488 134 aaPredicted RBP11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 DVL1O14640 695 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 NDUFA2O43678 99 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 FAM20BO75063 409 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 SPARCP09486 303 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 RAC2P15153 192 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 SPI1P17947 270 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 GGT2P36268 569 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 SLC15A1P46059 708 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 ENTPD1P49961 510 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 UBE2E1P51965 193 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 ESRRGP62508 458 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 ASRGL1Q7L266 308 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 SHFQ7M4L6 423 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 MRPL41Q8IXM3 137 aaKnown RBP11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 HS3ST5Q8IZT8 346 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 IQCF1Q8N6M8 205 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 Q8N7P7 452 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 OR51L1Q8NGJ5 315 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 ST8SIA4Q92187 359 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 TNFRSF14Q92956 283 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 DUS3LQ96G46 650 aaKnown RBP11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 CDCA4Q9BXL8 241 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
CTHRC1-201ENST00000330295 APOC1P02654 83 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 LCATP04180 440 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 GYPBP06028 91 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 GSTT1P30711 240 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 TEX30Q5JUR7 227 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 FAHD1Q6P587 224 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 SLC7A6Q92536 515 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 CENPNQ96H22 339 aaPredicted RBP11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 DMRTB1Q96MA1 342 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 PRR25Q96S07 402 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 INTS14Q96SY0 518 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 COPS4Q9BT78 406 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 OSBPL10Q9BXB5 764 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 OR51V1Q9H2C8 321 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 SP140LQ9H930 580 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 KRT84Q9NSB2 600 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
CTHRC1-201ENST00000330295 SYNGR1O43759 233 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 GLCEO94923 617 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 DBHP09172 617 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 CRISP1P54107 249 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 RPS7P62081 194 aaKnown RBP11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 CDK5Q00535 292 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms