RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 OGFRL1Q5TC84 451 aaPredicted RBP11.68□□□□□ -0.54
RPP40-201ENST00000319533 TMEM236Q5W0B7 351 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
RPP40-201ENST00000319533 WDR82Q6UXN9 313 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DPY19L4Q7Z388 723 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 CPOQ8IVL8 374 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 FGFRL1Q8N441 504 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 Q8N7P7 452 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 C8orf46Q8TAG6 207 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 CCL13Q99616 98 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 GABARAPL1Q9H0R8 117 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 TLNRD1Q9H1K6 362 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 TOR3AQ9H497 397 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 SP140LQ9H930 580 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 DUX4Q9UBX2 424 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 VPREB3Q9UKI3 123 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 CAB39Q9Y376 341 aaPredicted RBP11.68□□□□□ -0.54
RPP40-201ENST00000319533 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
RPP40-201ENST00000319533 hCG_1807616A0A1W2PRN6 198 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 ANKRD30BLA7E2S9 258 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 RNASEK-C17orf49H0YIS7 233 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 APOC1P02654 83 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 SLC2A1P11166 492 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 AMY2BP19961 511 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
RPP40-201ENST00000319533 LCN1P1Q5VSP4 162 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 PRSS45Q7RTY3 260 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 SLC36A1Q7Z2H8 476 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 PDZD9Q8IXQ8 264 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 TIGD4Q8IY51 512 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 OR1M1Q8NGA1 313 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 LRRC29Q8WV35 223 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 TNFRSF14Q92956 283 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 SGK3Q96BR1 496 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 ABHD6Q9BV23 337 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 N6AMT1Q9Y5N5 214 aa11.67□□□□□ -0.54
RPP40-201ENST00000319533 ANXA2P07355 339 aaKnown RBP11.66□□□□□ -0.54
RPP40-201ENST00000319533 TGFBR2P37173 567 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 NAA10P41227 235 aaPredicted RBP11.66□□□□□ -0.54
RPP40-201ENST00000319533 CX3CR1P49238 355 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 CSNK2BP67870 215 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 LRRC36Q1X8D7 754 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 C2orf68Q2NKX9 166 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 STUMQ69YW2 141 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 DHRS7BQ6IAN0 325 aaPredicted RBP11.66□□□□□ -0.54
RPP40-201ENST00000319533 C1orf122Q6ZSJ8 110 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.66□□□□□ -0.54
RPP40-201ENST00000319533 CMTM4Q8IZR5 234 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 OR8S1Q8NH09 359 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 RNF133Q8WVZ7 376 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 CENPNQ96H22 339 aaPredicted RBP11.66□□□□□ -0.54
RPP40-201ENST00000319533 CIB1Q99828 191 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 DCTN5Q9BTE1 182 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 DNTTIP1Q9H147 329 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 OAZ3Q9UMX2 235 aa11.66□□□□□ -0.54
RPP40-201ENST00000319533 ZNF816-ZNF321PA0A0X1KG74 233 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 hCG_38984A0A1B0GV85 526 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 BTBD17A6NE02 478 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 NPFFO15130 113 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 TBX1O43435 398 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 NDUFB3O43676 98 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 SELENOFO60613 162 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 MITFO75030 526 aaPredicted RBP11.65□□□□□ -0.54
RPP40-201ENST00000319533 LYNP07948 512 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 H2BFMP0C1H6 154 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 APOFQ13790 326 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 KDM4DQ6B0I6 523 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 BBS1Q8NFJ9 593 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 OR10Z1Q8NGY1 313 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 OR5R1Q8NH85 324 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 OTOSQ8NHW6 89 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 THEM6Q8WUY1 208 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 SLC29A1Q99808 456 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 SIRT7Q9NRC8 400 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 ONECUT1Q9UBC0 465 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 FBLN5Q9UBX5 448 aa11.65□□□□□ -0.54
RPP40-201ENST00000319533 SLC2A5P22732 501 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
RPP40-201ENST00000319533 EEF1B2P24534 225 aaKnown RBP11.64□□□□□ -0.55
RPP40-201ENST00000319533 OPRL1P41146 370 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 TIGD6Q17RP2 521 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 SLX4IPQ5VYV7 408 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 C1QL4Q86Z23 238 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 OR52H1Q8NGJ2 320 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
RPP40-201ENST00000319533 ITPKCQ96DU7 683 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 SEH1LQ96EE3 360 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 REEP6Q96HR9 211 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 OSBPL10Q9BXB5 764 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 OR10A2Q9H208 303 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 PPP1R3EQ9H7J1 279 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 HAO2Q9NYQ3 351 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 DNAJC27Q9NZQ0 273 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 H2AFY2Q9P0M6 372 aaPredicted RBP11.64□□□□□ -0.55
RPP40-201ENST00000319533 LAMP5Q9UJQ1 280 aa11.64□□□□□ -0.55
RPP40-201ENST00000319533 ZAR1LA6NP61 321 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms