RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RDH8Q9NYR8 311 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 KCNK7Q9Y2U2 307 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 ZZEF1O43149 2961 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 A0A0D9SG52 128 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 LINC01387J3KSC0 135 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 DNPH1O43598 174 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 TRAPPC6AO75865 159 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 ZBTB25P24278 435 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 CALCRP30988 508 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 OR3A4PP47883 348 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 SLC6A9P48067 706 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 TAS2R31P59538 309 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 ZNF546Q86UE3 836 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 ZFP62Q8NB50 900 aaPredicted RBP12.41□□□□□ -0.42
VRK3-201ENST00000316763 OR4K15Q8NH41 348 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 LRRC20Q8TCA0 184 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 C17orf50Q8WW18 174 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 SOX7Q9BT81 388 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 RBM24Q9BX46 236 aaKnown RBP12.41□□□□□ -0.42
VRK3-201ENST00000316763 CST11Q9H112 138 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 NCOA6Q14686 2063 aaPredicted RBP12.4□□□□□ -0.42
VRK3-201ENST00000316763 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 IGHV3-15A0A0B4J1V0 119 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 A0A0J9YW62 118 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 OR5H14A6NHG9 310 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 SSX5O60225 188 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 CRTAPO75718 401 aaPredicted RBP12.4□□□□□ -0.42
VRK3-201ENST00000316763 IL2RAP01589 272 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 PRF1P14222 555 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 HIST1H1DP16402 221 aaKnown RBP12.4□□□□□ -0.42
VRK3-201ENST00000316763 HLA-GP17693 338 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 MEOX1P50221 254 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 SUCLG1P53597 346 aaKnown RBP12.4□□□□□ -0.42
VRK3-201ENST00000316763 IL13RA1P78552 427 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 ENDOGQ14249 297 aaKnown RBP12.4□□□□□ -0.42
VRK3-201ENST00000316763 ZNF766Q5HY98 468 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 SFRP5Q5T4F7 317 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 C17orf107Q6ZR85 190 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 GGNQ86UU5 652 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 SLC51BQ86UW2 128 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 OR6K3Q8NGY3 331 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 ZNF385AQ96PM9 386 aaKnown RBP12.4□□□□□ -0.42
VRK3-201ENST00000316763 ULBP2Q9BZM5 246 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 MED9Q9NWA0 146 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 SESN1Q9Y6P5 492 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 MED12Q93074 2177 aa12.4□□□□□ -0.42
VRK3-201ENST00000316763 hCG_1807616A0A1W2PRN6 198 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 C9orf170A2RU37 121 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 F5H5K5 113 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 MTRF1O75570 445 aaKnown RBP12.39□□□□□ -0.43
VRK3-201ENST00000316763 PMP2P02689 132 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 NAT1P18440 290 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 RFC3P40938 356 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 HIST1H3AP68431 136 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 PHYHD1Q5SRE7 291 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 HIST2H3PS2Q5TEC6 136 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 HIST2H3AQ71DI3 136 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 TMEM123Q8N131 208 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 TMEM251Q8N6I4 163 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 TMEM178AQ8NBL3 297 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 TMEM104Q8NE00 496 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SUN5Q8TC36 379 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 MITD1Q8WV92 249 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 PP6455Q8WZ26 134 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
VRK3-201ENST00000316763 SPTSSAQ969W0 71 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 C10orf35Q96D05 121 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 C1orf147Q96MC9 270 aaPredicted RBP12.39□□□□□ -0.43
VRK3-201ENST00000316763 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SF3B5Q9BWJ5 86 aaKnown RBP12.39□□□□□ -0.43
VRK3-201ENST00000316763 OR10A2Q9H208 303 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 BANF2Q9H503 90 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 CSAG2Q9Y5P2 127 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 CACNA1GO43497 2377 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 DSPP15924 2871 aaKnown RBP12.39□□□□□ -0.43
VRK3-201ENST00000316763 TRAV14DV4A0A0A6YYC5 116 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 A0A0A6YYD4 124 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 K7EM74 188 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 TNFSF11O14788 317 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SOCS1O15524 211 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 DHRS3O75911 302 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 IGLV3-1P01715 115 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 CELA3AP09093 270 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SLC25A4P12235 298 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 MAGEA5P43359 124 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 PPP1R1AQ13522 171 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 ALKAL2Q6UX46 152 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 LRRC18Q8N456 261 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SSC4DQ8WTU2 575 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 ABHD17AQ96GS6 310 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms