RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RABEPKQ7Z6M1 372 aa11.83□□□□□ -0.52
DDX54-201ENST00000306014 TMEM123Q8N131 208 aa11.83□□□□□ -0.52
DDX54-201ENST00000306014 SSX3Q99909 188 aa11.83□□□□□ -0.52
DDX54-201ENST00000306014 ALX4Q9H161 411 aaPredicted RBP11.83□□□□□ -0.52
DDX54-201ENST00000306014 IFT22Q9H7X7 185 aa11.83□□□□□ -0.52
DDX54-201ENST00000306014 KLK13Q9UKR3 277 aa11.83□□□□□ -0.52
DDX54-201ENST00000306014 ST3GAL6Q9Y274 331 aa11.83□□□□□ -0.52
DDX54-201ENST00000306014 PNPP00491 289 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 S100A8P05109 93 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 CTSBP07858 339 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 NME1P15531 152 aaKnown RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 EIF2S3P41091 472 aaKnown RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 FHL5Q5TD97 284 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 OR10G3Q8NGC4 313 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 ZNRF4Q8WWF5 429 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 LIN37Q96GY3 246 aaPredicted RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 CALHM2Q9HA72 323 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 PTAFRP25105 342 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 INSM1Q01101 510 aaPredicted RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 REEP6Q96HR9 211 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 BGLAPP02818 100 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 GP1BAP07359 652 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 SUMO3P55854 103 aaPredicted RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 PRSS12P56730 875 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 MOGAT2Q3SYC2 334 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 FAM74A3Q4VXF1 159 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 LINC01590Q5TEZ4 76 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 BRICD5Q6PL45 260 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 CLEC9AQ6UXN8 241 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 STPG2Q8N412 459 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 CDX2Q99626 313 aaPredicted RBP11.82□□□□□ -0.52
DDX54-201ENST00000306014 MENTQ9BUN1 341 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 SLC39A9Q9NUM3 307 aa11.82□□□□□ -0.52
DDX54-201ENST00000306014 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 GLB1P16278 677 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 FAHD2BQ6P2I3 314 aaPredicted RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 FAHD2AQ96GK7 314 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 GNG13Q9P2W3 67 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 CLDN1O95832 211 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 IFNA10P01566 189 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 IFNA4P05014 189 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 B4GALT1P15291 398 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 IL2RGP31785 369 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 MECP2P51608 486 aaKnown RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 MICBQ29980 383 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 SLC25A26Q70HW3 274 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 CRIPAKQ8N1N5 446 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 OR56B2PQ8NGI1 322 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 OR1J1Q8NGS3 322 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 PP6455Q8WZ26 134 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 PLK3Q9H4B4 646 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 STRAPQ9Y3F4 350 aaKnown RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 FIGNL2A6NMB9 653 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 HS3ST1O14792 307 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 CST7O76096 145 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 FKBP2P26885 142 aaKnown RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 HBG1P69891 147 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 HBG2P69892 147 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 LCN15Q6UWW0 184 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 TFAP2EQ6VUC0 442 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 FBXL14Q8N1E6 418 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 MCHR2Q969V1 340 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 ADAT3Q96EY9 351 aaPredicted RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 FAAP24Q9BTP7 215 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 MED9Q9NWA0 146 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 CEBPZOSA8MTT3 80 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 ZNF705FA8MVS1 300 aaPredicted RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 ZNF705DP0CH99 300 aaPredicted RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 ZNF705BP0CI00 300 aaPredicted RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 TCN2P20062 427 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 AADACP22760 399 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 EFNB1P98172 346 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 ADIRFQ15847 76 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 ZNF239Q16600 458 aaKnown RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 AKR7LQ8NHP1 331 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 RPS4Y2Q8TD47 263 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
DDX54-201ENST00000306014 HDGFL3Q9Y3E1 203 aa11.81□□□□□ -0.52
DDX54-201ENST00000306014 H3BP45 60 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 TUSC2O75896 110 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 EDN3P14138 238 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 DVL1P1P54792 670 aaPredicted RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 ELLP55199 621 aaPredicted RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 TMEM33P57088 247 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 FAM24BQ8N5W8 94 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 OR2AE1Q8NHA4 323 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms