RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 EXTL1Q92935 676 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 SEH1LQ96EE3 360 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 HIST1H2AAQ96QV6 131 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 NICN1Q9BSH3 213 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 BEX2Q9BXY8 128 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 METTL9Q9H1A3 318 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 OR10A4Q9H209 315 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 BEX1Q9HBH7 125 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF71Q9NQZ8 489 aaPredicted RBP12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 A0A1W2PP11 408 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 HTR3BO95264 441 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 MGMTP16455 207 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 S100A1P23297 94 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 ARFRP1Q13795 201 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 NSUN5P2Q63ZY6 315 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 SPERTQ8NA61 448 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 DVL3Q92997 716 aaPredicted RBP12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 POM121L2Q96KW2 1035 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 GPR137Q96N19 417 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 FBLN5Q9UBX5 448 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 IL2RAP01589 272 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 HLA-DMAP28067 261 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 QRFPP83859 136 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 GK2Q14410 553 aaPredicted RBP12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 STEAP1BQ6NZ63 245 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 TECTBQ96PL2 329 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 LPAR5Q9H1C0 372 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 C20orf85Q9H1P6 137 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 MED28Q9H204 178 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 STARD10Q9Y365 291 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF850A8MQ14 1090 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 KIR2DL2P43627 348 aaPredicted RBP12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 FUT6P51993 359 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 OR8B8Q15620 311 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 OLFML2AQ68BL7 652 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 RPUSD3Q6P087 351 aaKnown RBP12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 FJX1Q86VR8 437 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 OR4C16Q8NGL9 310 aa12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
SHCBP1-201ENST00000303383 A0A0B4J293 547 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF736B4DX44 427 aaPredicted RBP12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 RAB3DO95716 219 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CD3DP04234 171 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CD83Q01151 205 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 HLXQ14774 488 aaPredicted RBP12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 KRTCAP3Q53RY4 240 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CD163Q86VB7 1156 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 OPA3Q9H6K4 179 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 SPRY1O43609 319 aaPredicted RBP12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ANGPTL7O43827 346 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 NGFP01138 241 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 TRAPPC2P0DI81 140 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 TRAPPC2BP0DI82 140 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 IL32P24001 234 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 TSC22D1Q15714 1073 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 COLCA1Q6ZS62 124 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 C1QL2Q7Z5L3 287 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CSNK2A3Q8NEV1 391 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 NUDCD2Q8WVJ2 157 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ELF5Q9UKW6 265 aaPredicted RBP12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 WDR1O75083 606 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 RLN1P04808 185 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CSN2P05814 226 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CPT2P23786 658 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 FOXF2Q12947 444 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 SPSB4Q96A44 273 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 ING3Q9NXR8 418 aa12.56□□□□□ -0.4
SHCBP1-201ENST00000303383 LOC105371267A0A1B0GV96 52 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 SOCS1O15524 211 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 BLVRBP30043 206 aaPredicted RBP12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 DMRTB1Q96MA1 342 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 GINS4Q9BRT9 223 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 PCDHB16Q9NRJ7 776 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 ANKRD30BLA7E2S9 258 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 K7ENP7 123 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 SSNA1O43805 119 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 GABRR1P24046 479 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 TNK1Q13470 666 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 TBR1Q16650 682 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 LINC00303Q3SY05 128 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 TMEM255AQ5JRV8 349 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 ZBTB37Q5TC79 503 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 INO80CQ6PI98 192 aaPredicted RBP12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 SSC4DQ8WTU2 575 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 AQP3Q92482 292 aa12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 REPIN1Q9BWE0 567 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 INTS1Q8N201 2190 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-201ENST00000303383 AMY2AP04746 511 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms