RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 MLF1P58340 268 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 CCDC157Q569K6 752 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 STPG2Q8N412 459 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 EIF4E3Q8N5X7 224 aaKnown RBP13.2□□□□□ -0.3
CCDC116-201ENST00000292779 FBXO17Q96EF6 278 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 LRFN3Q9BTN0 628 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 PLEK2Q9NYT0 353 aa13.2□□□□□ -0.3
CCDC116-201ENST00000292779 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PMS2P1A4D2B8 440 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 M0R135 149 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 CRHP06850 196 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 BLVRBP30043 206 aaPredicted RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 CBX5P45973 191 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 STARP49675 285 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 RAC1P63000 192 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 EIF3IQ13347 325 aaKnown RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 INO80EQ8NBZ0 244 aaPredicted RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 TMEM185AQ8NFB2 350 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 OR13G1Q8NGZ3 307 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PIGTQ969N2 578 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 ZNF799Q96GE5 643 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 CHST5Q9GZS9 411 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 SHARPINQ9H0F6 387 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 CHMP1AQ9HD42 196 aaPredicted RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 KNTC1P50748 2209 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 CBR3O75828 277 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 HPNP05981 417 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PSMB6P28072 239 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 ZNF84P51523 738 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 SNU13P55769 128 aaKnown RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 RPS18P62269 152 aaKnown RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 SLC9A3R2Q15599 337 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 SNAI3Q3KNW1 292 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PIGQQ9BRB3 760 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PECRQ9BY49 303 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC116-201ENST00000292779 PRR13Q9NZ81 148 aa13.19□□□□□ -0.3
CCDC116-201ENST00000292779 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 HTR3BO95264 441 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 ZNF806P0C7X5 589 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 OR3A2P47893 321 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 SUCLG1P53597 346 aaKnown RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 CLEC18BQ6UXF7 455 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 MOB3CQ70IA8 216 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 C20orf196Q8IYI0 205 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 HAS2Q92819 552 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 RTBDNQ9BSG5 229 aaPredicted RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 ELL3Q9HB65 397 aaPredicted RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 CSAG2Q9Y5P2 127 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 F5H0A9 414 aaPredicted RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 SFT2D2O95562 160 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 FPR2P25090 351 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 PXDC1Q5TGL8 231 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 AADACL3Q5VUY0 350 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 Q6ZSR3 168 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 PEG10Q86TG7 708 aaKnown RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 LHFPL1Q86WI0 220 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 INTS12Q96CB8 462 aaKnown RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 MRPS24Q96EL2 167 aaKnown RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 S100A13Q99584 98 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 NMES1Q9C002 83 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 BARX1Q9HBU1 254 aaPredicted RBP13.18□□□□□ -0.3
CCDC116-201ENST00000292779 PCDHGA1Q9Y5H4 931 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
CCDC116-201ENST00000292779 A0A1B0GW55 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
CCDC116-201ENST00000292779 ADAP1O75689 374 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
CCDC116-201ENST00000292779 B3GALT5-AS1P59052 145 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 SUPT4H1P63272 117 aaKnown RBP13.17□□□□□ -0.3
CCDC116-201ENST00000292779 MRPS34P82930 218 aaKnown RBP13.17□□□□□ -0.3
CCDC116-201ENST00000292779 BTN1A1Q13410 526 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 SMUG1Q53HV7 270 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 FAM27BQ5VT28 67 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 UNQ6126/PRO20091Q6UXV3 157 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 SLC16A14Q7RTX9 510 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 YRDCQ86U90 279 aaKnown RBP13.17□□□□□ -0.3
CCDC116-201ENST00000292779 TMEM17Q86X19 198 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 ROBO4Q8WZ75 1007 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms