RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF799Q96GE5 643 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 SLC26A1Q9H2B4 701 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 HS3ST3B1Q9Y662 390 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 A0A0G2JMM0 328 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 A0A1W2PPB8 328 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 A0A1W2PRS3 328 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 CCDC85CA6NKD9 419 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 DHRS7CA6NNS2 312 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 KIR3DP1A8MWS1 328 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 GPR31O00270 319 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 DHHO43323 396 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 DHRS3O75911 302 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 SFTPBP07988 381 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 ACKR3P25106 362 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 ADH6P28332 368 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 RRADP55042 308 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 S100A10P60903 97 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 FAM89BQ8N5H3 189 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 ZIC4Q8N9L1 334 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 S100A13Q99584 98 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 DKKL1Q9UK85 242 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 F10P00742 488 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 F12P00748 615 aaPredicted RBP22.35■■□□□ 1.17
RAB40C-201ENST00000248139 COX6A1P12074 109 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 PRF1P14222 555 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 YRDCQ86U90 279 aaKnown RBP22.35■■□□□ 1.17
RAB40C-201ENST00000248139 DYRK2Q92630 601 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 MARC2Q969Z3 335 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 CLDN23Q96B33 292 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 PIGQQ9BRB3 760 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 ULBP2Q9BZM5 246 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 NMES1Q9C002 83 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 OSGIN2Q9Y236 505 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 KLF7O75840 302 aaPredicted RBP22.35■■□□□ 1.17
RAB40C-201ENST00000248139 ACTL6AO96019 429 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 LIFP15018 202 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 LSM6P62312 80 aaKnown RBP22.35■■□□□ 1.17
RAB40C-201ENST00000248139 PNLIPRP3Q17RR3 467 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 PLEKHN1Q494U1 663 aaPredicted RBP22.35■■□□□ 1.17
RAB40C-201ENST00000248139 LHFPL1Q86WI0 220 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 BATF2Q8N1L9 274 aa22.35■■□□□ 1.17
RAB40C-201ENST00000248139 TEX13DA0A0J9YY54 714 aaPredicted RBP22.34■■□□□ 1.17
RAB40C-201ENST00000248139 MSTNO14793 375 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 FPR2P25090 351 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 HGFACQ04756 655 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 CHRFAM7AQ494W8 412 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM17Q86X19 198 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM123Q8N131 208 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 MAFAQ8NHW3 353 aaPredicted RBP22.34■■□□□ 1.17
RAB40C-201ENST00000248139 SGK3Q96BR1 496 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 IMMP1LQ96LU5 166 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 LHX6Q9UPM6 363 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 A0A1B0GW55 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 FAM230AA0A1W2PPH8 454 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 FOXI3A8MTJ6 420 aaPredicted RBP22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4L2P0CJ85 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4L3P0CJ86 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4L4P0CJ87 422 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4L5P0CJ88 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4L6P0CJ89 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4L7P0CJ90 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM225BP0DP42 221 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 NAT2P11245 290 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 AIMP2Q13155 320 aaKnown RBP22.34■■□□□ 1.17
RAB40C-201ENST00000248139 ZNF585AQ6P3V2 769 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM88Q6PEY1 159 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 PHYHIPLQ96FC7 376 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DUX4Q9UBX2 424 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 IGLV3-1P01715 115 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 RPS2P15880 293 aaKnown RBP22.34■■□□□ 1.17
RAB40C-201ENST00000248139 PDCD1Q15116 288 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 TAF9Q16594 264 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 BAP18Q8IXM2 172 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 HLA-CQ95604 372 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM54Q969K7 222 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 DNTTIP1Q9H147 329 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 SLC39A1Q9NY26 324 aa22.34■■□□□ 1.17
RAB40C-201ENST00000248139 FAM221AA4D161 298 aa22.33■■□□□ 1.17
RAB40C-201ENST00000248139 ABCD4O14678 606 aa22.33■■□□□ 1.17
RAB40C-201ENST00000248139 GLI4P10075 376 aa22.33■■□□□ 1.17
RAB40C-201ENST00000248139 OPRM1P35372 400 aa22.33■■□□□ 1.17
RAB40C-201ENST00000248139 RPS18P62269 152 aaKnown RBP22.33■■□□□ 1.17
RAB40C-201ENST00000248139 PEG10Q86TG7 708 aaKnown RBP22.33■■□□□ 1.17
RAB40C-201ENST00000248139 FAAP24Q9BTP7 215 aa22.33■■□□□ 1.17
RAB40C-201ENST00000248139 PLEKHJ1Q9NW61 149 aa22.33■■□□□ 1.17
RAB40C-201ENST00000248139 ZDBF2Q9HCK1 2354 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 LOC102725191A0A1B0GVB3 256 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 TOR1AO14656 332 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 ADCYAP1P18509 176 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 PTGER4P35408 488 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 ZNF239Q16600 458 aaKnown RBP22.33■■□□□ 1.16
RAB40C-201ENST00000248139 GUCA2BQ16661 112 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 ZNF774Q6NX45 483 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 CHST5Q9GZS9 411 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 GLS2Q9UI32 602 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 V9GYS6 101 aa22.33■■□□□ 1.16
RAB40C-201ENST00000248139 KLK3P07288 261 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-201ENST00000248139 MTCP1P56278 107 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 CDCP2Q5VXM1 449 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 OPN5Q6U736 354 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms