RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TMEM225Q6GV28 225 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 ZNF761Q86XN6 746 aaPredicted RBP11.52□□□□□ -0.56
MSH2-201ENST00000233146 OR2AJ1Q8NGZ0 328 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 ADAMTS15Q8TE58 950 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 HHIPL1Q96JK4 782 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 C4orf45Q96LM5 186 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 MS4A10Q96PG2 267 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 CIB3Q96Q77 187 aaPredicted RBP11.52□□□□□ -0.56
MSH2-201ENST00000233146 ABHD14AQ9BUJ0 271 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 ZNF319Q9P2F9 582 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 HEATR5BQ9P2D3 2071 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 LAMA3Q16787 3333 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 A0A0A6YYD5 115 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 A0A1W2PQ45 241 aaPredicted RBP11.52□□□□□ -0.57
MSH2-201ENST00000233146 A0A1W2PQY0 241 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 AHSA1O95433 338 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 RPS4Y1P22090 263 aaKnown RBP11.52□□□□□ -0.57
MSH2-201ENST00000233146 DTYMKP23919 212 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 FGF8P55075 233 aaPredicted RBP11.52□□□□□ -0.57
MSH2-201ENST00000233146 ENDOGQ14249 297 aaKnown RBP11.52□□□□□ -0.57
MSH2-201ENST00000233146 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 CSNK1A1LQ8N752 337 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 ADAMTS18Q8TE60 1221 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 KIR3DX1Q9H7L2 352 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 ZNF581Q9P0T4 197 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 CCDC163A0A0D9SF12 145 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 E5RGE8 158 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 NGFRP08138 427 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 UBE2G2P60604 165 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 IL24Q13007 206 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 TMEM184AQ6ZMB5 413 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 Q7L0L9 218 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 TMPRSS7Q7RTY8 843 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 NSG2Q9Y328 171 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 ENTPD2Q9Y5L3 495 aa11.52□□□□□ -0.57
MSH2-201ENST00000233146 NDUFS4O43181 175 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 GPR137BO60478 399 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 CD55P08174 381 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 WDR38Q5JTN6 314 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 CATSPERDQ86XM0 798 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 CDC20BQ86Y33 519 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 SLC16A11Q8NCK7 471 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
MSH2-201ENST00000233146 ALG14Q96F25 216 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 MAGT1Q9H0U3 335 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 TM7SF3Q9NS93 570 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 IFNA21P01568 189 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 NBEAP1P0C6P0 100 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 ACOT6Q3I5F7 207 aaPredicted RBP11.51□□□□□ -0.57
MSH2-201ENST00000233146 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 VAX1Q5SQQ9 334 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 TPTE2P1Q5T6R2 138 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 GPR157Q5UAW9 335 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 SCAMP4Q969E2 229 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 NKD1Q969G9 470 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 DNAJA3Q96EY1 480 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 SCGB3A2Q96PL1 93 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 SDF2L1Q9HCN8 221 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 HSPB7Q9UBY9 170 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 LAMP3Q9UQV4 416 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 FUT9Q9Y231 359 aa11.51□□□□□ -0.57
MSH2-201ENST00000233146 PLXNA2O75051 1894 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 C8orf89P0DMQ9 161 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 IGFBP3P17936 291 aaPredicted RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 GZMHP20718 246 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 MRPL2Q5T653 305 aaKnown RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 CST9Q5W186 159 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 SLC24A5Q71RS6 500 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 GLYATL1Q969I3 302 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 IMMP2LQ96T52 175 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 SF3B5Q9BWJ5 86 aaKnown RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 PCBD2Q9H0N5 130 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 COX11Q9Y6N1 276 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 LDB3O75112 727 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 FAM3BP58499 235 aaPredicted RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 LCN10Q6JVE6 187 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 CHST4Q8NCG5 386 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 SLC7A11Q9UPY5 501 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 PAM16Q9Y3D7 125 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 CORO1AP31146 461 aaKnown RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
MSH2-201ENST00000233146 EFNA3P52797 238 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 DPY19L2P2Q6ZN68 376 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 TOMM40LQ969M1 308 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 RASD2Q96D21 266 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 LPAR4Q99677 370 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 PADI3Q9ULW8 664 aa11.5□□□□□ -0.57
MSH2-201ENST00000233146 A0A1W2PR48 441 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 CLEC18AA5D8T8 446 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 F6UZH7 168 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms