RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF732B4DXR9 585 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 PHF1O43189 567 aaPredicted RBP10.6□□□□□ -0.71
LSM5-201ENST00000223084 SYT7O43581 403 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 NRASP01111 189 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 LHBP01229 141 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 HTR1AP08908 422 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 RPS2P15880 293 aaKnown RBP10.6□□□□□ -0.71
LSM5-201ENST00000223084 CEACAM21Q3KPI0 293 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 KLHL22Q53GT1 634 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 FAHD2BQ6P2I3 314 aaPredicted RBP10.6□□□□□ -0.71
LSM5-201ENST00000223084 Q6ZSR3 168 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 KCTD20Q7Z5Y7 419 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 FAHD2AQ96GK7 314 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 TLNRD1Q9H1K6 362 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 VCXQ9H320 206 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 FRRS1LQ9P0K9 344 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 CDC42EP3Q9UKI2 254 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 TMEM210A6NLX4 147 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 KIAA1324LA8MWY0 1029 aaPredicted RBP10.59□□□□□ -0.71
LSM5-201ENST00000223084 E9PI62 339 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 H0YAE9 185 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 H0YHG0 523 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 FSTL3O95633 263 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 GYPAP02724 150 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 LIMS3P0CW19 117 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 LIMS4P0CW20 117 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 ETV1P50549 477 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 AQP4P55087 323 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 ACTA2P62736 377 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 GNG3P63215 75 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 ACTG2P63267 376 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 IL18R1Q13478 541 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 FAM76BQ5HYJ3 339 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 CLVS2Q5SYC1 327 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 ZBTB37Q5TC79 503 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 TMEM42Q69YG0 159 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 LAIR2Q6ISS4 152 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 FDX2Q6P4F2 183 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
LSM5-201ENST00000223084 SYS1Q8N2H4 156 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 TFAP2CQ92754 450 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 ITFG2Q969R8 447 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 MRPL48Q96GC5 212 aaKnown RBP10.59□□□□□ -0.71
LSM5-201ENST00000223084 OR51I2Q9H344 312 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 FGF20Q9NP95 211 aaPredicted RBP10.59□□□□□ -0.71
LSM5-201ENST00000223084 MMP26Q9NRE1 261 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 INPP5EQ9NRR6 644 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 LPAR3Q9UBY5 353 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 MIOXQ9UGB7 285 aa10.59□□□□□ -0.71
LSM5-201ENST00000223084 TRAV38-1A0A0B4J264 116 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 TRAPPC2LH3BP13 241 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 TNFRSF13BO14836 293 aaPredicted RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 AKR7A2O43488 359 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 XPNPEP2O43895 674 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 FOXH1O75593 365 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 RHBDL1O75783 438 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 AVPP01185 164 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 UBCP0CG48 685 aaKnown RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 ESCO2Q56NI9 601 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 OR2G6Q5TZ20 316 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 DCAF12L2Q5VW00 463 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 DCDC5Q6ZRR9 648 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 FAM90A1Q86YD7 464 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 OR8B3Q8NGG8 313 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 OR5A2Q8NGI9 324 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 OR10AC1Q8NH08 325 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 TRMT10AQ8TBZ6 339 aaKnown RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 NPRL2Q8WTW4 380 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 GGHQ92820 318 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 NEIL1Q96FI4 390 aaPredicted RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 OR8B2Q96RD0 313 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 SSBP3Q9BWW4 388 aaPredicted RBP10.58□□□□□ -0.72
LSM5-201ENST00000223084 TMPRSS13Q9BYE2 586 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 WDR13Q9H1Z4 485 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 RASSF4Q9H2L5 321 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 PLEKHA1Q9HB21 404 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 ERVK-18Q9QC07 812 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 HSPE1-MOB4S4R3N1 261 aa10.58□□□□□ -0.72
LSM5-201ENST00000223084 A0A0G2JMP0 313 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 A0A0X1KG70 313 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 A0A1B0GW55 424 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 ANKRD61A6NGH8 418 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 OR5B21A6NL26 309 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DHRS7CA6NNS2 312 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 SRRM5B3KS81 715 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 ADAM20O43506 726 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 TFF1P04155 84 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 FAM157CP0CG43 387 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L2P0CJ85 424 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L3P0CJ86 424 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L4P0CJ87 422 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L5P0CJ88 424 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L6P0CJ89 424 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L7P0CJ90 424 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms