RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TMEM88Q6PEY1 159 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 C1QL2Q7Z5L3 287 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 LINC00518Q8N0U6 118 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 RASL10BQ96S79 203 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 SPSB2Q99619 263 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 CHST5Q9GZS9 411 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 TLNRD1Q9H1K6 362 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 TREM1Q9NP99 234 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 C1orf123Q9NWV4 160 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 MRPS17Q9Y2R5 130 aaKnown RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 CYC1P08574 325 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 PNLIPP16233 465 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 CAV2P51636 162 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 ZNF133P52736 654 aaPredicted RBP11.68□□□□□ -0.54
SRP54-201ENST00000216774 CLDN17P56750 224 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 ZNF385CQ66K41 422 aaPredicted RBP11.68□□□□□ -0.54
SRP54-201ENST00000216774 FOXL2NBQ6ZUU3 175 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 RAB11FIP2Q7L804 512 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 OR5D18Q8NGL1 313 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 OR51F2Q8NH61 342 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 HAS2Q92819 552 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 S100A13Q99584 98 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 MLXQ9UH92 298 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 RARRES3Q9UL19 164 aa11.68□□□□□ -0.54
SRP54-201ENST00000216774 A0A087WZY1 265 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 PMS2P1A4D2B8 440 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 STMND1H3BQB6 276 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 CSNK1A1P48729 337 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 H3F3AP84243 136 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 LIN37Q96GY3 246 aaPredicted RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 PHF7Q9BWX1 381 aaPredicted RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 DEFB126Q9BYW3 111 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 RALGAPA1Q6GYQ0 2036 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 C5orf63A6NC05 138 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 TP53I11O14683 189 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 APOC1P02654 83 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 FCGR2AP12318 317 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 SERPINA2P20848 420 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 OTX1P32242 354 aaPredicted RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 S100A10P60903 97 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 HIST1H3AP68431 136 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 HIST2H3PS2Q5TEC6 136 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 HIST2H3AQ71DI3 136 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 TMEM54Q969K7 222 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 ZNF576Q9H609 170 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 RHOFQ9HBH0 211 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 OR2S2Q9NQN1 319 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
SRP54-201ENST00000216774 RCC2Q9P258 522 aaKnown RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
SRP54-201ENST00000216774 MTRF1O75570 445 aaKnown RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 HEXAP06865 529 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 HOXB5P09067 269 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 HKR1P10072 659 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 PRKACAP17612 351 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 KLK2P20151 261 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 PTGER4P35408 488 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 ENDOGQ14249 297 aaKnown RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 NPRL2Q8WTW4 380 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 SHDQ96IW2 340 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 MICU1Q9BPX6 476 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 CNTNAP3Q9BZ76 1288 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 SAV1Q9H4B6 383 aaPredicted RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 ACKR4Q9NPB9 350 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 DECR2Q9NUI1 292 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 PCDHGA1Q9Y5H4 931 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 F5H5K5 113 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 EIF1BO60739 113 aaKnown RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 LRP3O75074 770 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 CST4P01036 141 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 KNG1P01042 644 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 CTSDP07339 412 aaPredicted RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 SFTPBP07988 381 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 FAHP16930 419 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 RBM39Q14498 530 aaKnown RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 SHBQ15464 509 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 SULF2Q8IWU5 870 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 SGPP2Q8IWX5 399 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 SEMA6DQ8NFY4 1073 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 NABP1Q96AH0 204 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
SRP54-201ENST00000216774 HRH4Q9H3N8 390 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 TUBD1Q9UJT1 453 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 EDARQ9UNE0 448 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 PIGLQ9Y2B2 252 aa11.66□□□□□ -0.54
SRP54-201ENST00000216774 CEP192Q8TEP8 1941 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 VAMP5O95183 116 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 ZNF708P17019 499 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 SULT1A2P50226 295 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms