RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PAQR9Q6ZVX9 377 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 OR5AN1Q8NGI8 311 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 WBP1Q96G27 269 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 MS4A4AQ96JQ5 239 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 CHIAQ9BZP6 476 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 SLC25A31Q9H0C2 315 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 SMG9Q9H0W8 520 aaKnown RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 NOX4Q9NPH5 578 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 INPP5EQ9NRR6 644 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 CISHQ9NSE2 258 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 PPIAL4AQ9Y536 164 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 SNX11Q9Y5W9 270 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 CAMTA1Q9Y6Y1 1673 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SMIM9A6NGZ8 99 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 MEIS3P2A8K0S8 358 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 B5MCH6 92 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 RNASET2O00584 256 aaKnown RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 FCN3O75636 299 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 LBX1P52954 281 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 RABGGTBP53611 331 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 LILRA4P59901 499 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SYPL2Q5VXT5 272 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 OR4N5Q8IXE1 308 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 WIPI2Q9Y4P8 454 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM131Q92545 1883 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 XKRYO14609 159 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 KNG1P01042 644 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 IFNW1P05000 195 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 NPPBP16860 134 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 MEF2BQ02080 365 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 HHEXQ03014 270 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 PRRT3Q5FWE3 981 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 C5orf24Q7Z6I8 188 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 OR11H4Q8NGC9 324 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SPATA33Q96N06 139 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 INSM2Q96T92 566 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 P2RX4Q99571 388 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 DUSP21Q9H596 190 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 FNDC4Q9H6D8 234 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 YBX2Q9Y2T7 364 aaKnown RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 WSB1Q9Y6I7 421 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 PTPRDP23468 1912 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SH2D7A6NKC9 451 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF785A8K8V0 405 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 CCKBRP32239 447 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ST3GAL2Q16842 350 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ACOT6Q3I5F7 207 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF684Q5T5D7 378 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 CNIH2Q6PI25 160 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM184AQ6ZMB5 413 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SDSLQ96GA7 329 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 IL17FQ96PD4 163 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 GPR22Q99680 433 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ABHD14AQ9BUJ0 271 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 C20orf27Q9GZN8 174 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ACOT13Q9NPJ3 140 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SLC7A7Q9UM01 511 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 GAGE12HA6NDE8 117 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 NAP1L6A6NFF2 107 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 WTIPA6NIX2 430 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 FAM183AA6NL82 134 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 HLA-DQB2P05538 268 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 COX7A2P14406 83 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 HIST1H1CP16403 213 aaKnown RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SELEP16581 610 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF37AP17032 561 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SHC1P29353 583 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 TFPI2P48307 235 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 RHOGP84095 191 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 TRMT10BQ6PF06 316 aaKnown RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 PNKDQ8N490 385 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 LRRC75AQ8NAA5 344 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 OR1S2Q8NGQ3 325 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ORAI3Q9BRQ5 295 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SPATC1LQ9H0A9 340 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SLC25A51Q9H1U9 297 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 CUL9Q8IWT3 2517 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 WIPF3A6NGB9 483 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 H7BYZ3 331 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 TNFRSF1BP20333 461 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 GDF5P43026 501 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 OR3A2P47893 321 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 IDH3AP50213 366 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 HTR6P50406 440 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 PAFAH1B2P68402 229 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 CEACAM7Q14002 265 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 WDR25Q64LD2 544 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 KRTCAP2Q8N6L1 136 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 RNF149Q8NC42 400 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 OR5A1Q8NGJ0 315 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 VN1R17PQ8TDU5 208 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 GPR119Q8TDV5 335 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SLC25A46Q96AG3 418 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 NIPSNAP3BQ9BS92 247 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ADAT1Q9BUB4 502 aaKnown RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 SYNPO2LQ9H987 977 aa3.85□□□□□ -1.79
SCN3A-209ENST00000639244 PATZ1Q9HBE1 687 aaKnown RBP3.85□□□□□ -1.79
SCN3A-209ENST00000639244 ANKRD10Q9NXR5 420 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms