RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 HELTA6NFD8 242 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 GEMIN2O14893 280 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 TBX18O95935 607 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 SYPL1Q16563 259 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 YOD1Q5VVQ6 348 aaPredicted RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 Q8IYB0 196 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 MBD3L1Q8WWY6 194 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 NAA60Q9H7X0 242 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 RCL1Q9Y2P8 373 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 PAM16Q9Y3D7 125 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 A0A1W2PNV4 684 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 PITX3O75364 302 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 DUSP5Q16690 384 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 FAM71E1Q6IPT2 247 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 FDX2Q6P4F2 183 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 PRSS45Q7RTY3 260 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 PLEKHB1Q9UF11 243 aaPredicted RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 CARHSP1Q9Y2V2 147 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 LSM2Q9Y333 95 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 YLPM1P49750 1951 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 RECKO95980 971 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 PWWP2BQ6NUJ5 590 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 TRAT1Q6PIZ9 186 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 PLXDC1Q8IUK5 500 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 FBXL17Q9UF56 701 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 POLDIP2Q9Y2S7 368 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 SIPA1L3O60292 1781 aaPredicted RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 GTF3C1Q12789 2109 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 TRAV34A0A0B4J273 112 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 CLDN15P56746 228 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 OR8B8Q15620 311 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 OR11L1Q8NGX0 322 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 BCL2L2Q92843 193 aaPredicted RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 RTP3Q9BQQ7 232 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 RCC2Q9P258 522 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 DOCK3Q8IZD9 2030 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 CORTO00230 105 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 SLCO2B1O94956 709 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 CDKN2AP42771 156 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 KTI12Q96EK9 354 aaPredicted RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 TMEM147Q9BVK8 224 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 TMEFF2Q9UIK5 374 aaPredicted RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 NHSQ6T4R5 1651 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 DOCK10Q96BY6 2186 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 TCRBV21S2A2A0A5A6 115 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 FEZF1A0PJY2 475 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 HLA-DQB1P01920 261 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 WNT1P04628 370 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 SERF2P84101 59 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 DUSP8Q13202 625 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 RAB37Q96AX2 223 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 RSRP1Q9BUV0 290 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 MMACHCQ9Y4U1 282 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 IGFBP7Q16270 282 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 MARCH1Q8TCQ1 289 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 TPPP3Q9BW30 176 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 FOXJ2Q9P0K8 574 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 NXT1Q9UKK6 140 aaKnown RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 UBE2L5PA0A1B0GUS4 154 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 FAM171A2A8MVW0 826 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 PRAMEF4O60810 478 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 RPL27P61353 136 aaKnown RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 TMEM267Q0VDI3 215 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 SPATA45Q537H7 98 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 MOB3CQ70IA8 216 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 KREMEN2Q8NCW0 462 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 FIZ1Q96SL8 496 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 PARP12Q9H0J9 701 aaKnown RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 USP22Q9UPT9 525 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 DRGXA6NNA5 263 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 SLC25A34Q6PIV7 304 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 STXBP6Q8NFX7 210 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 ADAT1Q9BUB4 502 aaKnown RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 TMEM70Q9BUB7 260 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 P4HTMQ9NXG6 502 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 COL22A1Q8NFW1 1626 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 KIR2DS5A0A0G2JLQ3 304 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 A0A0G2JNG1 304 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 KIR2DS3K7RE56 304 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 OR2J2O76002 312 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 CDS2O95674 445 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 BCL2P10415 239 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 CST5P28325 142 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 KIR2DS5Q14953 304 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 PLAC9Q5JTB6 97 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 LPAR4Q99677 370 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 NDUFAF3Q9BU61 184 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 HINT3Q9NQE9 182 aaKnown RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 DOCK5Q9H7D0 1870 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 A0A0G2JLL6 359 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 GNG10P50151 68 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 ACVR1Q04771 509 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 SLCO4C1Q6ZQN7 724 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 PRRT2Q7Z6L0 340 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 ROBO4Q8WZ75 1007 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 PARP14Q460N5 1801 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 A0A0B4J293 547 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 IGSF23A1L1A6 192 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms