RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ROM1Q03395 351 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 POU4F2Q12837 409 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 TMED1Q13445 227 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 DEFB112Q30KQ8 113 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 PRR31Q5SQ13 230 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 RUSC1-AS1Q66K80 236 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 KCTD18Q6PI47 426 aaPredicted RBP12.58□□□□□ -0.4
TGFB1-202ENST00000597453 DEGS2Q6QHC5 323 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 PRSS45Q7RTY3 260 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
TGFB1-202ENST00000597453 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 RFKQ969G6 155 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 SPSB4Q96A44 273 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 TECTBQ96PL2 329 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 SMURF1Q9HCE7 757 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 C8orf4Q9NR00 106 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 MRPL15Q9P015 296 aaKnown RBP12.58□□□□□ -0.4
TGFB1-202ENST00000597453 NOP16Q9Y3C1 178 aaKnown RBP12.58□□□□□ -0.4
TGFB1-202ENST00000597453 LRRC42Q9Y546 428 aa12.58□□□□□ -0.4
TGFB1-202ENST00000597453 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 ENSAO43768 121 aaKnown RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 FCN3O75636 299 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 ANXA2P07355 339 aaKnown RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 GRPP07492 148 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 HCCSP53701 268 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 PSMA6P60900 246 aaKnown RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 SNRPGP62308 76 aaKnown RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 OR8B8Q15620 311 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 SLC25A30Q5SVS4 291 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 KRT77Q7Z794 578 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 SLC35F2Q8IXU6 374 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 GCSAMQ8N6F7 178 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 OR52H1Q8NGJ2 320 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 OR51G2Q8NGK0 314 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 TBX15Q96SF7 602 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 PCGF1Q9BSM1 259 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 PRDM13Q9H4Q3 707 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 CLN6Q9NWW5 311 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 SMPD3Q9NY59 655 aaPredicted RBP12.57□□□□□ -0.4
TGFB1-202ENST00000597453 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 COPS3Q9UNS2 423 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 GMPPBQ9Y5P6 360 aa12.57□□□□□ -0.4
TGFB1-202ENST00000597453 OOEPA6NGQ2 149 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 TBX1O43435 398 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 ADAM20O43506 726 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF254O75437 659 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 MMP9P14780 707 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 MDKP21741 143 aaPredicted RBP12.56□□□□□ -0.4
TGFB1-202ENST00000597453 OMGP23515 440 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 DCTDP32321 178 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 CFHR2P36980 270 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 NPY4RP50391 375 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 OCLNQ16625 522 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 GPR157Q5UAW9 335 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 MEDAGQ5VYS4 303 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 C16orf87Q6PH81 154 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 FAM57BQ71RH2 274 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 WDR86Q86TI4 376 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF679Q8IYX0 411 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 PACRGLQ8N7B6 248 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 UBE2FQ969M7 185 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 OR8B4Q96RC9 309 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 MROQ9BYG7 248 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 OR10A2Q9H208 303 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF696Q9H7X3 374 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 FAM118AQ9NWS6 357 aa12.56□□□□□ -0.4
TGFB1-202ENST00000597453 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.56□□□□□ -0.4
TGFB1-202ENST00000597453 LOC100130705A0A1B0GUX0 176 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 A6NLC8 198 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF879B4DU55 563 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF670-ZNF695F2Z2N8 137 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 DLGAP1O14490 977 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 SLC16A6O15403 523 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 GYPAP02724 150 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 CFL1P23528 166 aaKnown RBP12.55□□□□□ -0.4
TGFB1-202ENST00000597453 PEX2P28328 305 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 CXCR4P61073 352 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 IL13RA1P78552 427 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 EGR3Q06889 387 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 TIGD6Q17RP2 521 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 CD276Q5ZPR3 534 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 LPCAT4Q643R3 524 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF322Q6U7Q0 402 aaPredicted RBP12.55□□□□□ -0.4
TGFB1-202ENST00000597453 FAM90A1Q86YD7 464 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 C11orf53Q8IXP5 236 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 SPERTQ8NA61 448 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 TMIGD2Q96BF3 282 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 REEP6Q96HR9 211 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 PGAM5Q96HS1 289 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 RGCCQ9H4X1 137 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 TNFRSF19Q9NS68 423 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 ERVK-18Q9QC07 812 aa12.55□□□□□ -0.4
TGFB1-202ENST00000597453 IGHV3OR15-7A0A075B7D8 119 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms