RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ANKRD55Q3KP44 614 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 APCDD1LQ8NCL9 501 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF2Q9BSG1 426 aaPredicted RBP17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 BORCS7-ASMTA0A0B4J1R7 106 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 K7EP13 123 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 C1orf105O95561 183 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 CISD3P0C7P0 127 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 SERPINA4P29622 427 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 CCKARP32238 428 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 KLF3P57682 345 aaPredicted RBP17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 C2orf73Q8N5S3 287 aaPredicted RBP17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 TSLPQ969D9 159 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 NKD1Q969G9 470 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 ERGIC1Q969X5 290 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 MRM2Q9UI43 246 aaKnown RBP17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 RPH3ALQ9UNE2 315 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 A6NIZ1 184 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 GAB4Q2WGN9 574 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 GXYLT1Q4G148 440 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 COA6Q5JTJ3 125 aaKnown RBP17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 PHF19Q5T6S3 580 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF761Q86XN6 746 aaPredicted RBP17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF595Q8IYB9 648 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 CYB561D1Q8N8Q1 229 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 MCHR2Q969V1 340 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 TP53RKQ96S44 253 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 NMNAT3Q96T66 252 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 MS4A8Q9BY19 250 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 SH3BGRL3Q9H299 93 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 ARV1Q9H2C2 271 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 RXFP3Q9NSD7 469 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 IKZF2Q9UKS7 526 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.31
SEMA4B-215ENST00000560089 TSPAN2O60636 221 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 CCKBRP32239 447 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 VAMP2P63027 116 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 IL15RAQ13261 267 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 P2RY6Q15077 328 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF550Q7Z398 422 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 FAM160A2Q8N612 972 aaPredicted RBP17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF321PQ8N8H1 164 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 COX18Q8N8Q8 333 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 NUP43Q8NFH3 380 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 COL26A1Q96A83 441 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 ADAD1Q96M93 576 aaKnown RBP17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 FAM83CQ9BQN1 747 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 GINS3Q9BRX5 216 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 NMNAT2Q9BZQ4 307 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF860A6NHJ4 632 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 CLDN34H7C241 214 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 C8orf89P0DMQ9 161 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 ALDH3B1P43353 468 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 RND3P61587 244 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 HOGA1Q86XE5 327 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 MAML2Q8IZL2 1156 aaPredicted RBP17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 NOXO1Q8NFA2 376 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 OR1L6Q8NGR2 347 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 TMEM230Q96A57 120 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF764Q96H86 408 aaPredicted RBP17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 LYSMD1Q96S90 227 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 NAGKQ9UJ70 344 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 TCFL5Q9UL49 500 aa17.01■□□□□ 0.31
SEMA4B-215ENST00000560089 SPTBP11277 2137 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF705FA8MVS1 300 aaPredicted RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF705DP0CH99 300 aaPredicted RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 ZNF705BP0CI00 300 aaPredicted RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 NOVA1P51513 510 aaKnown RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 CCL20P78556 96 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 ATP6V1FQ16864 119 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 OR52E1Q8NGJ3 308 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 CENPVL1A0A0U1RR11 272 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 PPP5D1E7EU14 171 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 ATXN7O15265 892 aaPredicted RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 LYPD3O95274 346 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 UMODP07911 640 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 FOLR1P15328 257 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 PI3P19957 117 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 OR10J1P30954 320 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 APOBEC1P41238 236 aaKnown RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 WASP42768 502 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 SPINT3P49223 89 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 RND2P52198 227 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 GLYATL3Q5SZD4 288 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 FAM166AQ6J272 317 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 TMEM182Q6ZP80 229 aaPredicted RBP17■□□□□ 0.31
SEMA4B-215ENST00000560089 GCNT2Q8N0V5 402 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 SCAMP4Q969E2 229 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 MIEN1Q9BRT3 115 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 CABLES2Q9BTV7 478 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 DEC1Q9P2X7 70 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 KLHDC2Q9Y2U9 406 aa17■□□□□ 0.31
SEMA4B-215ENST00000560089 F5P12259 2224 aa16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 CYB5R3P00387 301 aaPredicted RBP16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 IGHEP01854 428 aa16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 POU2F2P09086 479 aa16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 HLA-DRB3P79483 266 aa16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 ZPLD1Q8TCW7 415 aa16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 GRHL3Q8TE85 626 aa16.99■□□□□ 0.31
SEMA4B-215ENST00000560089 WFIKKN1Q96NZ8 548 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms