RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 GLB1P16278 677 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 GABRR1P24046 479 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 RPL12P30050 165 aaKnown RBP9.66□□□□□ -0.86
USP3-206ENST00000558157 HRH1P35367 487 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 ID4P47928 161 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 RPS4XP62701 263 aaKnown RBP9.66□□□□□ -0.86
USP3-206ENST00000558157 SLC35A1P78382 337 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 HIKESHIQ53FT3 197 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 GLYATL3Q5SZD4 288 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 GGNBP1Q5YKI7 109 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 TMEM225Q6GV28 225 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 OR2T2Q6IF00 324 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 FBXO42Q6P3S6 717 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 LEG1Q6P5S2 330 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 ULK3Q6PHR2 472 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 RNF44Q7L0R7 432 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 C9orf40Q8IXQ3 194 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 FAM71E2Q8N5Q1 922 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 METTL21AQ8WXB1 218 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 MVB12AQ96EY5 273 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 RCC1LQ96I51 464 aaKnown RBP9.66□□□□□ -0.86
USP3-206ENST00000558157 DUSP23Q9BVJ7 150 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 KCNK15Q9H427 330 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 PLEKHA2Q9HB19 425 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 PILRAQ9UKJ1 303 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 RAB22AQ9UL26 194 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 IGHV1OR21-1A0A087WYE8 117 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 LY6G6EA0A0G2JKS1 128 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 A0A1W2PS29 197 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 SYNDIG1LA6NDD5 238 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 TLCD2A6NGC4 264 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 STMND1H3BQB6 276 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 GUSBP08236 651 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 IGFBP3P17936 291 aaPredicted RBP9.66□□□□□ -0.86
USP3-206ENST00000558157 ALOX5APP20292 161 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 KIR3DL2P43630 455 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 C1orf100Q5SVJ3 147 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 TTLL10Q6ZVT0 673 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 CDRT4Q8N9R6 151 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 OR8G5Q8NG78 346 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 Q8WTZ3 238 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 CA5BP1Q8WTZ4 195 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 OR2A5Q96R48 311 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 HIST1H2BLQ99880 126 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 ZFYVE21Q9BQ24 234 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 SLC25A31Q9H0C2 315 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 FBXL17Q9UF56 701 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 C19orf53Q9UNZ5 99 aaPredicted RBP9.66□□□□□ -0.86
USP3-206ENST00000558157 DHDHQ9UQ10 334 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 MMP24Q9Y5R2 645 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 U3KQA8 63 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 GOLGA4Q13439 2230 aaKnown RBP9.66□□□□□ -0.86
USP3-206ENST00000558157 FRYLO94915 3013 aa9.66□□□□□ -0.86
USP3-206ENST00000558157 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 PEX12O00623 359 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 GCGP01275 180 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 IFI6P09912 130 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 CAMLGP49069 296 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 ZNF616Q08AN1 781 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 DEFB110Q30KQ9 67 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 VAX1Q5SQQ9 334 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 ZNF318Q5VUA4 2279 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 CLEC18BQ6UXF7 455 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 SLC35D2Q76EJ3 337 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 GPR137CQ8N3F9 429 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 NKAIN3Q8N8D7 197 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 COX18Q8N8Q8 333 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 ZPLD1Q8TCW7 415 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 NELFAQ9H3P2 528 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 METTL8Q9H825 291 aaKnown RBP9.65□□□□□ -0.86
USP3-206ENST00000558157 FAM60AQ9NP50 221 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 B4DEV8 164 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 M0QZK8 103 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 ZNF264O43296 627 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 BRINP1O60477 761 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 CYTIPO60759 359 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 GGCTO75223 188 aaKnown RBP9.65□□□□□ -0.86
USP3-206ENST00000558157 OR5AC1P0C628 307 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 EMC4Q5J8M3 183 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 WDR38Q5JTN6 314 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 GUSBP11Q6P575 273 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 ZNF101Q8IZC7 436 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 CARFQ8N187 725 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 OR51F2Q8NH61 342 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 NT5CQ8TCD5 201 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 MARCH1Q8TCQ1 289 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 RASD2Q96D21 266 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 LOXL4Q96JB6 756 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 GINS3Q9BRX5 216 aa9.65□□□□□ -0.86
USP3-206ENST00000558157 A0A087WV62 115 aa9.64□□□□□ -0.87
USP3-206ENST00000558157 FITM1A5D6W6 292 aa9.64□□□□□ -0.87
USP3-206ENST00000558157 PRR33A8MZF0 331 aa9.64□□□□□ -0.87
USP3-206ENST00000558157 H0YGG7 62 aa9.64□□□□□ -0.87
USP3-206ENST00000558157 M0R143 59 aa9.64□□□□□ -0.87
USP3-206ENST00000558157 PHOX2AO14813 284 aa9.64□□□□□ -0.87
USP3-206ENST00000558157 TOX3O15405 576 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms