RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 CD200P41217 278 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 CCR9P51686 369 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 GBX2P52951 348 aaPredicted RBP18.97■□□□□ 0.63
PABPN1-206ENST00000556809 RIPPLY1Q0D2K3 151 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 MAB21L1Q13394 359 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 AVPI1Q5T686 147 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 OR2G6Q5TZ20 316 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 CELF2-AS1Q8N7Q2 184 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 LINC01356Q8N9X3 169 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 SPERTQ8NA61 448 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 HAVCR2Q8TDQ0 301 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 RASSF4Q9H2L5 321 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 Q9H521 79 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 NARFLQ9H6Q4 476 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 WIPI2Q9Y4P8 454 aa18.97■□□□□ 0.63
PABPN1-206ENST00000556809 JMJD1CQ15652 2540 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.96■□□□□ 0.63
PABPN1-206ENST00000556809 ZNF816-ZNF321PA0A0X1KG74 233 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 E9PI62 339 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 CCDC159P0C7I6 412 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 C21orf33P30042 268 aaPredicted RBP18.96■□□□□ 0.63
PABPN1-206ENST00000556809 HNRNPA0Q13151 305 aaKnown RBP18.96■□□□□ 0.63
PABPN1-206ENST00000556809 ALKBH1Q13686 389 aaKnown RBP18.96■□□□□ 0.63
PABPN1-206ENST00000556809 ZBTB37Q5TC79 503 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 Q6ZSR3 168 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 OR14K1Q8NGZ2 314 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 OR8S1Q8NH09 359 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 OR52N1Q8NH53 320 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 PPP1R3EQ9H7J1 279 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 DCAF16Q9NXF7 216 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 KCNS2Q9ULS6 477 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 PPP1R3CQ9UQK1 317 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 PIGLQ9Y2B2 252 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 TPRKBQ9Y3C4 175 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 MPC1Q9Y5U8 109 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 V9GYS6 101 aa18.96■□□□□ 0.63
PABPN1-206ENST00000556809 CUBNO60494 3623 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 IGHV3-64DA0A0J9YX35 117 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 LOC107986453A0A1B0GWG9 222 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 FAM157AC9JC47 383 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 PTGES3LE9PB15 166 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 SYT7O43581 403 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 CDK1P06493 297 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 FAHP16930 419 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 TGM4P49221 684 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 MZT1Q08AG7 82 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 PRDX4Q13162 271 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 KRT74Q7RTS7 529 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 PIGCQ92535 297 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 MYDGFQ969H8 173 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 GCM1Q9NP62 436 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 ABCB9Q9NP78 766 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 PAK1IP1Q9NWT1 392 aaPredicted RBP18.95■□□□□ 0.62
PABPN1-206ENST00000556809 ENPP5Q9UJA9 477 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 PCDHGB5Q9Y5G0 923 aa18.95■□□□□ 0.62
PABPN1-206ENST00000556809 ANXA2P2A6NMY6 339 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 OR4C45A6NMZ5 311 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 DHRS7CA6NNS2 312 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 ZNF850A8MQ14 1090 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 ISG15P05161 165 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 RBMXP38159 391 aaKnown RBP18.94■□□□□ 0.62
PABPN1-206ENST00000556809 GATA4P43694 442 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 SLC3A1Q07837 685 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 CHRFAM7AQ494W8 412 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 TMEM244Q5VVB8 128 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 MOGAT3Q86VF5 341 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 RDH10Q8IZV5 341 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 CCDC54Q8NEL0 328 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 RAB1CQ92928 201 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 ITPKCQ96DU7 683 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 TMEM106BQ9NUM4 274 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 C14orf119Q9NWQ9 140 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 CDC42EP3Q9UKI2 254 aa18.94■□□□□ 0.62
PABPN1-206ENST00000556809 B4DSR2 109 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 H3BSH0 61 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 DENRO43583 198 aaKnown RBP18.93■□□□□ 0.62
PABPN1-206ENST00000556809 PTBP3O95758 552 aaKnown RBP18.93■□□□□ 0.62
PABPN1-206ENST00000556809 GTF2A1P52655 376 aaPredicted RBP18.93■□□□□ 0.62
PABPN1-206ENST00000556809 SLC35A2P78381 396 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 PRAMEF6Q5VXH4 476 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 ZDHHC23Q8IYP9 409 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 ZNF676Q8N7Q3 588 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 TIMD4Q96H15 378 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 PLEKHA1Q9HB21 404 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 BABAM2Q9NXR7 383 aa18.93■□□□□ 0.62
PABPN1-206ENST00000556809 IFNL4K9M1U5 179 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 MYL12BO14950 172 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 ZNF12P17014 697 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 CRHBPP24387 322 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 DVL1P1P54792 670 aaPredicted RBP18.92■□□□□ 0.62
PABPN1-206ENST00000556809 CCDC58Q4VC31 144 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 RBM48Q5RL73 367 aaKnown RBP18.92■□□□□ 0.62
PABPN1-206ENST00000556809 FAM120AOSQ5T036 256 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 RNLSQ5VYX0 342 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 XAF1Q6GPH4 301 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 RPL22L1Q6P5R6 122 aaKnown RBP18.92■□□□□ 0.62
PABPN1-206ENST00000556809 ZNF485Q8NCK3 441 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 ZNF420Q8TAQ5 688 aaPredicted RBP18.92■□□□□ 0.62
PABPN1-206ENST00000556809 GATAD2BQ8WXI9 593 aa18.92■□□□□ 0.62
PABPN1-206ENST00000556809 OR5P3Q8WZ94 311 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms