RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MS4A15Q8N5U1 240 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 IQCF1Q8N6M8 205 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ACBD7Q8N6N7 88 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 SIGLECL1Q8N7X8 197 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ZDHHC22Q8N966 263 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ZNF485Q8NCK3 441 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 OR52L1Q8NGH7 329 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 AKR7LQ8NHP1 331 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 PFN4Q8NHR9 129 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 SLC25A40Q8TBP6 338 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ASB10Q8WXI3 467 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 TRIM63Q969Q1 353 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 SGTBQ96EQ0 304 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 MRPL48Q96GC5 212 aaKnown RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 DCLRE1CQ96SD1 692 aaKnown RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 GPA33Q99795 319 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 OR2J1Q9GZK6 312 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 PPP1R3EQ9H7J1 279 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ESM1Q9NQ30 184 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 C14orf119Q9NWQ9 140 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 TBC1D24Q9ULP9 559 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 N6AMT1Q9Y5N5 214 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 A0A1W2PPL8 197 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 A0A1W2PQ09 198 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 ZSCAN5BA6NJL1 495 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 SLC22A31A6NKX4 558 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 TMPRSS2O15393 492 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 FBXO24O75426 580 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 OR7A10O76100 309 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 SERPINA3P01011 423 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 HLA-DQB1P01920 261 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 THY1P04216 161 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MMP7P09237 267 aaPredicted RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 SBK2P0C263 348 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 SLC2A2P11168 524 aaPredicted RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 TNFSF4P23510 183 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MYL9P24844 172 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 ERP29P30040 261 aaKnown RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 RFX2P48378 723 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 PPP1CBP62140 327 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 BTG1P62324 171 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MRPS34P82930 218 aaKnown RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 TNFAIP6P98066 277 aaPredicted RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 CD300CQ08708 224 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 BAK1Q16611 211 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 C10orf128Q5T292 105 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 RFPL4BQ6ZWI9 263 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 TMPRSS11FQ6ZWK6 438 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 SPICQ8N5J4 248 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 GRPEL2Q8TAA5 225 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 ENKURQ8TC29 256 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 KLF14Q8TD94 323 aaPredicted RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 TMEM255BQ8WV15 326 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 PHYHIPQ92561 330 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MARS2Q96GW9 593 aaKnown RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 POM121L2Q96KW2 1035 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MRI1Q9BV20 369 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MIXL1Q9H2W2 232 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 SLA2Q9H6Q3 261 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 EGLN3Q9H6Z9 239 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MSL2Q9HCI7 577 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 MEPEQ9NQ76 525 aaPredicted RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 RBFOX1Q9NWB1 397 aaKnown RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 HAO2Q9NYQ3 351 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 CGGBP1Q9UFW8 167 aaPredicted RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 PURGQ9UJV8 347 aaKnown RBP7.47□□□□□ -1.21
TDP1-208ENST00000553989 ZDHHC8Q9ULC8 765 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 NPTNQ9Y639 398 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 AUP1Q9Y679 476 aa7.47□□□□□ -1.21
TDP1-208ENST00000553989 DAPL1A0PJW8 107 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 DNAJC9-AS1A6NH13 148 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 J3QRE1 110 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ORC5O43913 435 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 LYPD3O95274 346 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ABHD16AO95870 558 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 IFNGP01579 166 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 CD1AP06126 327 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 GSTT2P0CG29 244 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 GSTT2BP0CG30 244 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 HKR1P10072 659 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 TALDO1P37837 337 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 WNT5AP41221 380 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 RBM34P42696 430 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 MAP2K3P46734 347 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MMP15P51511 669 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 PCBD1P61457 104 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 RPS25P62851 125 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 PITPNAQ00169 270 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 PSG4Q00888 419 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 FABP5Q01469 135 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MXD1Q05195 221 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 BAMBIQ13145 260 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ZNF79Q15937 498 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 HIST3H3Q16695 136 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 PRR31Q5SQ13 230 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 MBNL2Q5VZF2 373 aaKnown RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 ARL9Q6T311 187 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 ZNF322Q6U7Q0 402 aaPredicted RBP7.46□□□□□ -1.22
TDP1-208ENST00000553989 ZNF620Q6ZNG0 422 aa7.46□□□□□ -1.22
TDP1-208ENST00000553989 BCDIN3DQ7Z5W3 292 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms