RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 LHBP01229 141 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 LIPFP07098 398 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 CSF1P09603 554 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 H2BFMP0C1H6 154 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 IRF2P14316 349 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 CFL1P23528 166 aaKnown RBP9.77□□□□□ -0.85
SRP54-203ENST00000553544 PSMB10P40306 273 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 NAA10P41227 235 aaPredicted RBP9.77□□□□□ -0.85
SRP54-203ENST00000553544 HOXA4Q00056 320 aaPredicted RBP9.77□□□□□ -0.85
SRP54-203ENST00000553544 SNAPC1Q16533 368 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 TIGD6Q17RP2 521 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 CD276Q5ZPR3 534 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 RUSC1-AS1Q66K80 236 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 LYPD2Q6UXB3 125 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 ZNF841Q6ZN19 808 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 Q6ZPA2 131 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 DCDC5Q6ZRR9 648 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 FAM57BQ71RH2 274 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 REC114Q7Z4M0 266 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 C11orf53Q8IXP5 236 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 ZSCAN4Q8NAM6 433 aaPredicted RBP9.77□□□□□ -0.85
SRP54-203ENST00000553544 THEM6Q8WUY1 208 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 GATAD2BQ8WXI9 593 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 LRTOMTQ8WZ04 291 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 FN3KRPQ9HA64 309 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 TVP23BQ9NYZ1 205 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 DNAJC27Q9NZQ0 273 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 RNF7Q9UBF6 113 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 KLHDC2Q9Y2U9 406 aa9.77□□□□□ -0.85
SRP54-203ENST00000553544 CENPVL3A0A0U1RRI6 287 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 ANKRD30BLA7E2S9 258 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 PHYHO14832 338 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 ENSAO43768 121 aaKnown RBP9.76□□□□□ -0.85
SRP54-203ENST00000553544 TOX4O94842 621 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 EPHA2P29317 976 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 IER3P46695 156 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 GSK3AP49840 483 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 HCCSP53701 268 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 MZT1Q08AG7 82 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 APOFQ13790 326 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 OR8B8Q15620 311 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 ZSCAN26Q16670 478 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 BEAN1Q3B7T3 259 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 WDR25Q64LD2 544 aaPredicted RBP9.76□□□□□ -0.85
SRP54-203ENST00000553544 KDM4DQ6B0I6 523 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 DEGS2Q6QHC5 323 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 GDPGP1Q6ZNW5 385 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 KRT74Q7RTS7 529 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 AMIGO2Q86SJ2 522 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 WDR86Q86TI4 376 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.76□□□□□ -0.85
SRP54-203ENST00000553544 GCSAMQ8N6F7 178 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 C19orf18Q8NEA5 215 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 PGAM5Q96HS1 289 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 C9orf16Q9BUW7 83 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 YIPF3Q9GZM5 350 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 OR10A2Q9H208 303 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 DPAGT1Q9H3H5 408 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 NIPAL2Q9H841 368 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 C8orf4Q9NR00 106 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 ACOXLQ9NUZ1 547 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 C14orf119Q9NWQ9 140 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 H2AFY2Q9P0M6 372 aaPredicted RBP9.76□□□□□ -0.85
SRP54-203ENST00000553544 OAZ3Q9UMX2 235 aa9.76□□□□□ -0.85
SRP54-203ENST00000553544 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.75□□□□□ -0.85
SRP54-203ENST00000553544 ZAR1LA6NP61 321 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 ZNF879B4DU55 563 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 G3V4G9 280 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 LGALS8O00214 317 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 PRKYO43930 277 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 MITFO75030 526 aaPredicted RBP9.75□□□□□ -0.85
SRP54-203ENST00000553544 GRPP07492 148 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 DCTDP32321 178 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 CFHR2P36980 270 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 NPY4RP50391 375 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 PSMA6P60900 246 aaKnown RBP9.75□□□□□ -0.85
SRP54-203ENST00000553544 CDC42P60953 191 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 RPS7P62081 194 aaKnown RBP9.75□□□□□ -0.85
SRP54-203ENST00000553544 FAM189A2Q15884 450 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 KPRPQ5T749 579 aaPredicted RBP9.75□□□□□ -0.85
SRP54-203ENST00000553544 AADACL4Q5VUY2 407 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 SLX4IPQ5VYV7 408 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 TEX36Q5VZQ5 186 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 C12orf73Q69YU5 71 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 ZNF826PQ6ZT77 177 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 GID4Q8IVV7 300 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 CSNK2A3Q8NEV1 391 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 LYZL4Q96KX0 146 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 SEMA6AQ9H2E6 1030 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 C16orf95Q9H693 158 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 PPP1R3EQ9H7J1 279 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 S100A14Q9HCY8 104 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 BRD7Q9NPI1 651 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.75□□□□□ -0.85
SRP54-203ENST00000553544 C1orf123Q9NWV4 160 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 CTSZQ9UBR2 303 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 LAMP5Q9UJQ1 280 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 RHBDD3Q9Y3P4 386 aa9.75□□□□□ -0.85
SRP54-203ENST00000553544 LRP12Q9Y561 859 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms