RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CLN8Q9UBY8 286 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 MRM2Q9UI43 246 aaKnown RBP12.83□□□□□ -0.36
SHMT2-204ENST00000553324 GTF2A1LQ9UNN4 478 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 TANC2Q9HCD6 1990 aa12.83□□□□□ -0.36
SHMT2-204ENST00000553324 A0A0A6YYJ9 748 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 LOC100130705A0A1B0GUX0 176 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 DHRS7CA6NNS2 312 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 TRAPPC2LH3BP13 241 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 TCF21O43680 179 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 ENTPD6O75354 484 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 SRSF10O75494 262 aaKnown RBP12.82□□□□□ -0.36
SHMT2-204ENST00000553324 MUC1P15941 1255 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-204ENST00000553324 PSMB10P40306 273 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 PITPNBP48739 271 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 ZSCAN26Q16670 478 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 MICBQ29980 383 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 C11orf91Q3C1V1 193 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 CEACAM21Q3KPI0 293 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 CD276Q5ZPR3 534 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 SFRP4Q6FHJ7 346 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-204ENST00000553324 KCTD8Q6ZWB6 473 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 C1QL2Q7Z5L3 287 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 EGFL6Q8IUX8 553 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 C11orf53Q8IXP5 236 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 GCSAMQ8N6F7 178 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 BOLLQ8N9W6 283 aaKnown RBP12.82□□□□□ -0.36
SHMT2-204ENST00000553324 CCDC54Q8NEL0 328 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 OR5A2Q8NGI9 324 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 OR10Z1Q8NGY1 313 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 MRPL48Q96GC5 212 aaKnown RBP12.82□□□□□ -0.36
SHMT2-204ENST00000553324 FAM71F1Q96KD3 344 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-204ENST00000553324 TBX5Q99593 518 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 SLC29A1Q99808 456 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 MRI1Q9BV20 369 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 MMP26Q9NRE1 261 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 PIGLQ9Y2B2 252 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
SHMT2-204ENST00000553324 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 CDIPTO14735 213 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 PHF1O43189 567 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-204ENST00000553324 TTRP02766 147 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF12P17014 697 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 SEC61A1P61619 476 aaKnown RBP12.81□□□□□ -0.36
SHMT2-204ENST00000553324 GNG3P63215 75 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF684Q5T5D7 378 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 TEX36Q5VZQ5 186 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF826PQ6ZT77 177 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 DOK3Q7L591 496 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 FAM220AQ7Z4H9 259 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF555Q8NEP9 628 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 C12orf43Q96C57 262 aaKnown RBP12.81□□□□□ -0.36
SHMT2-204ENST00000553324 RNFT2Q96EX2 444 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 MBOAT4Q96T53 435 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 ADI1Q9BV57 179 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 FAM118AQ9NWS6 357 aa12.81□□□□□ -0.36
SHMT2-204ENST00000553324 LOC105371242A0A075B767 164 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 OR5B21A6NL26 309 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 DLGAP1O14490 977 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 TNFRSF13BO14836 293 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-204ENST00000553324 SLC16A6O15403 523 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 MAGEB4O15481 346 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-204ENST00000553324 RPP14O95059 124 aaKnown RBP12.8□□□□□ -0.36
SHMT2-204ENST00000553324 NRASP01111 189 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 AVPP01185 164 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 LIPFP07098 398 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 PPIAL4GP0DN37 164 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 FPR2P25090 351 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 PAX8Q06710 450 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 MFGE8Q08431 387 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-204ENST00000553324 WDR25Q64LD2 544 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-204ENST00000553324 WDR82Q6UXN9 313 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-204ENST00000553324 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF671Q8TAW3 534 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 LRRC29Q8WV35 223 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 PPP1R14AQ96A00 147 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 MDFIQ99750 246 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 PPP1R3EQ9H7J1 279 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 KAAG1Q9UBP8 84 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 OPN4Q9UHM6 478 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 V9GYS6 101 aa12.8□□□□□ -0.36
SHMT2-204ENST00000553324 KIR2DS1A0A191URI9 304 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 DAPL1A0PJW8 107 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 RNF212BA8MTL3 300 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF732B4DXR9 585 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 J3QRE1 110 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 ADAM20O43506 726 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 APOL3O95236 402 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 CD80P33681 288 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 GPM6AP51674 278 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 CLVS2Q5SYC1 327 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms