RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 BCDIN3DQ7Z5W3 292 aaKnown RBP8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 GID4Q8IVV7 300 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PHC2Q8IXK0 858 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 C11orf53Q8IXP5 236 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 DHRSXQ8N5I4 330 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 C19orf18Q8NEA5 215 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR8B12Q8NGG6 310 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR8B3Q8NGG8 313 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF418Q8TF45 676 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CYGBQ8WWM9 190 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 TFAP2CQ92754 450 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR8B4Q96RC9 309 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR8B2Q96RD0 313 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 MBOAT4Q96T53 435 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 MICU1Q9BPX6 476 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 MRI1Q9BV20 369 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 SSBP3Q9BWW4 388 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 RIBC2Q9H4K1 309 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ABCB9Q9NP78 766 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR5V1Q9UGF6 321 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 WARS2Q9UGM6 360 aaKnown RBP8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 MPC1Q9Y5U8 109 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 AUP1Q9Y679 476 aa8.13□□□□□ -1.11
TNFRSF1A-214ENST00000543048 TRAV38-1A0A0B4J264 116 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 A0A0U1RQV5 110 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 KIR2DS1A0A191URI9 304 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 hCG_1807616A0A1W2PRN6 198 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 A6NLC8 198 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ANXA2P2A6NMY6 339 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF850A8MQ14 1090 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF670-ZNF695F2Z2N8 137 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 M0R129 80 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PSMD9O00233 223 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 EPHA1P21709 976 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 FPR2P25090 351 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CD80P33681 288 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PSMB10P40306 273 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PITPNBP48739 271 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 NPY4RP50391 375 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 RIDAP52758 137 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ADARB1P78563 741 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 IL5RAQ01344 420 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PAX2Q02962 417 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR8B8Q15620 311 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZIK1Q3SY52 487 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 TTC23Q5W5X9 447 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 SFRP4Q6FHJ7 346 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF322Q6U7Q0 402 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 BTNL3Q6UXE8 466 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF841Q6ZN19 808 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF826PQ6ZT77 177 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 USP43Q70EL4 1123 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 KRT74Q7RTS7 529 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 SLC35F2Q8IXU6 374 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF555Q8NEP9 628 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR1M1Q8NGA1 313 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 TRUB1Q8WWH5 349 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PIGCQ92535 297 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 LYZL4Q96KX0 146 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 HIST1H2AAQ96QV6 131 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 APOL4Q9BPW4 351 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 C19orf24Q9BVV8 132 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PAPOLGQ9BWT3 736 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ANKRD60Q9BZ19 345 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PBOV1Q9GZY1 135 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PPP1R3EQ9H7J1 279 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ADGRL4Q9HBW9 690 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CLN6Q9NWW5 311 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 FAM206AQ9NX38 181 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ERVK-18Q9QC07 812 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 IKZF2Q9UKS7 526 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 COPS3Q9UNS2 423 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 DNHD1Q96M86 4753 aa8.12□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OOEPA6NGQ2 149 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PRR32B1ATL7 298 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 SLC16A6O15403 523 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 VENTXO95231 258 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 FSHBP01225 129 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 OR2T7P0C7T2 308 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ATP6V1B1P15313 513 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CD33P20138 364 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ACKR3P25106 362 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 HTR1FP30939 366 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CFHR2P36980 270 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CDC42P60953 191 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CXCR4P61073 352 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 EGR3Q06889 387 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 RIPPLY1Q0D2K3 151 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 PRDX4Q13162 271 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 TMED1Q13445 227 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 IL18R1Q13478 541 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 MED21Q13503 144 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 ZNF829Q3KNS6 432 aaPredicted RBP8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
TNFRSF1A-214ENST00000543048 CD276Q5ZPR3 534 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms