RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CDC14BO60729 498 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 GATBO75879 557 aaKnown RBP15.88■□□□□ 0.13
VPS33A-205ENST00000541169 NRASP01111 189 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 KIR3DL2P43630 455 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 CHN2P52757 468 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 WNT4P56705 351 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 PRSS12P56730 875 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 MAB21L1Q13394 359 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 TMEM42Q69YG0 159 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 NANOGP1Q8N7R0 232 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 OR5A2Q8NGI9 324 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 OR14K1Q8NGZ2 314 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 OR5P3Q8WZ94 311 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 PIGCQ92535 297 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 YIPF5Q969M3 257 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 PPP1R14AQ96A00 147 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 ITPKCQ96DU7 683 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 COX4I2Q96KJ9 171 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 NEK6Q9HC98 313 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 CSMD1Q96PZ7 3565 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 ITPR3Q14573 2671 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 ZNF850A8MQ14 1090 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 OGG1O15527 345 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 PPIHO43447 177 aaKnown RBP15.87■□□□□ 0.13
VPS33A-205ENST00000541169 CD1AP06126 327 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 C21orf33P30042 268 aaPredicted RBP15.87■□□□□ 0.13
VPS33A-205ENST00000541169 NANOS3P60323 173 aaKnown RBP15.87■□□□□ 0.13
VPS33A-205ENST00000541169 GNG3P63215 75 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 ACSM1Q08AH1 577 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 FAM76BQ5HYJ3 339 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 OR2G6Q5TZ20 316 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 PRSS48Q7RTY5 328 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 THRSPQ92748 146 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 BPESC1Q9GZL8 116 aa15.87■□□□□ 0.13
VPS33A-205ENST00000541169 TRIM64A6NGJ6 449 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 TRIM64BA6NI03 449 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 H7C1Q1 480 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 ZFPL1O95159 310 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 FAHP16930 419 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 CFHR2P36980 270 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 GABARAPL2P60520 117 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 CDK5R1Q15078 307 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 MUC20Q8N307 709 aaPredicted RBP15.86■□□□□ 0.13
VPS33A-205ENST00000541169 ZNF485Q8NCK3 441 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 RPS4Y2Q8TD47 263 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 GATAD2BQ8WXI9 593 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 SMIM19Q96E16 107 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 RNF170Q96K19 258 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 CLEC2DQ9UHP7 191 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 SLC7A11Q9UPY5 501 aa15.86■□□□□ 0.13
VPS33A-205ENST00000541169 ANKRD61A6NGH8 418 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 RNF223E7ERA6 249 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 LYNX1G3V0Z9 82 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 CD2P06729 351 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 LYNX1P0DP58 116 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 ZNF20P17024 532 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 MVKQ03426 396 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 KCNJ8Q15842 424 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 ODF4Q2M2E3 257 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 UTS2BQ765I0 119 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 MOGAT3Q86VF5 341 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 GPR148Q8TDV2 347 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 CHST5Q9GZS9 411 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 TLNRD1Q9H1K6 362 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 RNF7Q9UBF6 113 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 NPTNQ9Y639 398 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 DYSFO75923 2080 aa15.85■□□□□ 0.13
VPS33A-205ENST00000541169 LOC100289279A0A1B0GTE1 492 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 LRP5LA4QPB2 252 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 E9PI62 339 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 TMEM178BH3BS89 294 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 INHBBP09529 407 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 EEF1B2P24534 225 aaKnown RBP15.84■□□□□ 0.13
VPS33A-205ENST00000541169 GPR50Q13585 617 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 CNN3Q15417 329 aaKnown RBP15.84■□□□□ 0.13
VPS33A-205ENST00000541169 SPHARQ15513 63 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 TMEM155Q4W5P6 130 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 YIF1BQ5BJH7 314 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 PLCXD3Q63HM9 321 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 BIVMQ86UB2 503 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 ZNF573Q86YE8 665 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 SPICQ8N5J4 248 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 OR1M1Q8NGA1 313 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 OR5D14Q8NGL3 314 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 OR13C3Q8NGS6 347 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 SOX7Q9BT81 388 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 ZNF281Q9Y2X9 895 aa15.84■□□□□ 0.13
VPS33A-205ENST00000541169 A6NLC8 198 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 PLPP2O43688 288 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 ALX3O95076 343 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 GRPP07492 148 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 PRKACBP22694 351 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 MDH2P40926 338 aaKnown RBP15.83■□□□□ 0.12
VPS33A-205ENST00000541169 BTG1P62324 171 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF154Q13106 437 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 IRF3Q14653 427 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 DMKNQ6E0U4 476 aaPredicted RBP15.83■□□□□ 0.12
VPS33A-205ENST00000541169 MOB3CQ70IA8 216 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 SERPINA12Q8IW75 414 aa15.83■□□□□ 0.12
VPS33A-205ENST00000541169 RDH10Q8IZV5 341 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms