RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 GSK3BP49841 420 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 SULT1A1P50225 295 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 POLR2HP52434 150 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 PNLIPRP1P54315 467 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 GAS1P54826 345 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 MLF1P58340 268 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 RPL32P62910 135 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 HYAL1Q12794 435 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FHL3Q13643 280 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 C1DQ13901 141 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 GPNMBQ14956 572 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 IAH1Q2TAA2 248 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 ACSM3Q53FZ2 586 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 LRRC10Q5BKY1 277 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ZNF57Q68EA5 555 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 CNIH2Q6PI25 160 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 Q7L0L9 218 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 OLIG3Q7RTU3 272 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 CUZD1Q86UP6 607 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TMEM173Q86WV6 379 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 TGIF2LYQ8IUE0 185 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 LAS2Q8IYD9 372 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 CSNK1A1LQ8N752 337 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 COX18Q8N8Q8 333 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 NOXO1Q8NFA2 376 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 OR4B1Q8NGF8 309 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 OR4A4PQ8NGN8 299 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 SFXN5Q8TD22 340 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 VN1R17PQ8TDU5 208 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 UBTD2Q8WUN7 234 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 EEF1AKMT1Q8WVE0 214 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 PCNPQ8WW12 178 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 RXFP2Q8WXD0 754 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 SOCS4Q8WXH5 440 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 LRRC58Q96CX6 371 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 MUCL1Q96DR8 90 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 RTP4Q96DX8 246 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TSSK3Q96PN8 268 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 DUX5Q96PT3 197 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ACCSQ96QU6 501 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ST6GALNAC5Q9BVH7 336 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 LINC00470Q9BZP3 86 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 LAT2Q9GZY6 243 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 OR52D1Q9H346 318 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TAF9BQ9HBM6 251 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 APMAPQ9HDC9 416 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TXNRD2Q9NNW7 524 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 RPS10P5Q9NQ39 176 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 DMAC2Q9NW81 257 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ASIC5Q9NY37 505 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ZNF230Q9UIE0 474 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 RALYQ9UKM9 306 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 TBX21Q9UL17 535 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TRAPPC2LQ9UL33 140 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ICAM5Q9UMF0 924 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 SIGLEC7Q9Y286 467 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 SLC17A4Q9Y2C5 497 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 PTGDR2Q9Y5Y4 395 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 SCN7AQ01118 1682 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 BORCS7-ASMTA0A0B4J1R7 106 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 IGHV1-69-2A0A0G2JMI3 117 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 EDDM13A0A1B0GTR0 161 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 TRDV1A0A1B0GX56 115 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 AQP7P3A6NL99 342 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 C15orf65H3BRN8 121 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ZNF593O00488 134 aaPredicted RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 GABRPO00591 440 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CYB561D2O14569 222 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 HNRNPDLO14979 420 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 TPST2O60704 377 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 EEDO75530 441 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 PROSCO94903 275 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 UBL3O95164 117 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 NDUFB8O95169 186 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 GJB5O95377 273 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 VTNP04004 478 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 RLN1P04808 185 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 PRKCGP05129 697 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 OR5G3P0C626 314 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 SFTA3P0C7M3 94 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 LIPCP11150 499 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 SELEP16581 610 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CELP19835 753 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 PSMB1P20618 241 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 OMGP23515 440 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 NFYBP25208 207 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ATP6V0CP27449 155 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CST5P28325 142 aaPredicted RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 ARRB2P32121 409 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 APLNRP35414 380 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ELK3P41970 407 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CSRP3P50461 194 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 RND2P52198 227 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 PDX1P52945 283 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ART1P52961 327 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 TIAL1Q01085 375 aaKnown RBP eCLIP4.83□□□□□ -1.64
CD44-236ENST00000533222 DPTQ07507 201 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 GABRA6Q16445 453 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 SYPL1Q16563 259 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms