RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 OTUB2Q96DC9 234 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 XPO6Q96QU8 1125 aaKnown RBP0.85□□□□□ -2.27
NUP98-218ENST00000530516 EMC6Q9BV81 110 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 UCK2Q9BZX2 261 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 ZYG11BQ9C0D3 744 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 SLC7A5P2Q9GIP4 190 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 ABCG5Q9H222 651 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 MRM3Q9HC36 420 aaKnown RBP0.85□□□□□ -2.27
NUP98-218ENST00000530516 FAM60AQ9NP50 221 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 COX16Q9P0S2 106 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 SLC22A7Q9Y694 548 aa0.85□□□□□ -2.27
NUP98-218ENST00000530516 A0A1W2PNM2 257 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 H3BQ85 93 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 CPLX1O14810 134 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 PSPHP1O15172 72 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 SLC19A2O60779 497 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 IGHMP01871 453 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 CLTAP09496 248 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 SLC35G6P0C7Q6 338 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 IFI30P13284 250 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 NBL1P41271 181 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 OR1G1P47890 313 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 ATP5IP56385 69 aaPredicted RBP0.84□□□□□ -2.27
NUP98-218ENST00000530516 DEFB103AP81534 67 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 ZNF33AQ06730 810 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 KRTAP21-3Q3LHN1 58 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 TCF24Q7RTU0 167 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 TTC29Q8NA56 475 aaPredicted RBP0.84□□□□□ -2.27
NUP98-218ENST00000530516 OR56A4Q8NGH8 313 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 NRGNQ92686 78 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 C20orf24Q9BUV8 137 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 SFXN3Q9BWM7 321 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 RAB22AQ9UL26 194 aa0.84□□□□□ -2.27
NUP98-218ENST00000530516 BAZ1BQ9UIG0 1483 aaKnown RBP0.84□□□□□ -2.28
NUP98-218ENST00000530516 PRRC2BQ5JSZ5 2229 aaKnown RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 IGHV6-1A0A0B4J1U7 121 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 TMEM72A0PK05 275 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 TSPAN11A1L157 253 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 CTNSO60931 367 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 IGKV1-16P04430 117 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 CBR1P16152 277 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 CXCR1P25024 350 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 RFC3P40938 356 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 UBE2MP61081 183 aaKnown RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 OR1Q1Q15612 314 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 TRMT5Q32P41 509 aaKnown RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 CEP55Q53EZ4 464 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 LRRC66Q68CR7 880 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 METAP1DQ6UB28 335 aaPredicted RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 LRRC8AQ8IWT6 810 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 ITLN2Q8WWU7 325 aaPredicted RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 ZNF606Q8WXB4 792 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 RBPMSQ93062 196 aaKnown RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 RASD2Q96D21 266 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 PRRC1Q96M27 445 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 TGS1Q96RS0 853 aaKnown RBP0.83□□□□□ -2.28
NUP98-218ENST00000530516 OR2S2Q9NQN1 319 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 PTTG3PQ9NZH4 202 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 CES1P1Q9UKY3 287 aa0.83□□□□□ -2.28
NUP98-218ENST00000530516 ICE1Q9Y2F5 2266 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 SSH2Q76I76 1423 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 GOLGA8OA6NCC3 632 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 GOLGA8NF8WBI6 632 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 CCNB2O95067 398 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 CTSGP08311 255 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 THRAP10827 490 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 GTF2E2P29084 291 aaKnown RBP0.82□□□□□ -2.28
NUP98-218ENST00000530516 TPBGQ13641 420 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 HHATQ5VTY9 493 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 ZYG11AQ6WRX3 759 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 PDPNQ86YL7 162 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 OR52E5Q8NH55 327 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 RAB1CQ92928 201 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 YIPF5Q969M3 257 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 C8orf44Q96CB5 159 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 TPD52L3Q96J77 140 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 ZNF75AQ96N20 296 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 C20orf166-AS1Q96NR2 134 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 ALS2CR12Q96Q35 445 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 PEBP4Q96S96 227 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 HEBP1Q9NRV9 189 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 INIPQ9NRY2 104 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 TREX1Q9NSU2 369 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 STX18Q9P2W9 335 aaKnown RBP0.82□□□□□ -2.28
NUP98-218ENST00000530516 CAB39Q9Y376 341 aaPredicted RBP0.82□□□□□ -2.28
NUP98-218ENST00000530516 ZNF337Q9Y3M9 751 aa0.82□□□□□ -2.28
NUP98-218ENST00000530516 GGTLC3B5MD39 225 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 LSM1O15116 133 aaKnown RBP0.81□□□□□ -2.28
NUP98-218ENST00000530516 CDH16O75309 829 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 ENTPD6O75354 484 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 RAB5AP20339 215 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 CSRP1P21291 193 aaKnown RBP0.81□□□□□ -2.28
NUP98-218ENST00000530516 STOMP27105 288 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 PRSS3P35030 304 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 RGS6P49758 472 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 OR2B8PP59922 312 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 KDSRQ06136 332 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 INCA1Q0VD86 236 aa0.81□□□□□ -2.28
NUP98-218ENST00000530516 HADHQ16836 314 aaKnown RBP0.81□□□□□ -2.28
NUP98-218ENST00000530516 MRPL2Q5T653 305 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms