RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 CLDN18P56856 261 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 RND3P61587 244 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 GNB2P62879 340 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 ID2Q02363 134 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 ENDOGQ14249 297 aaKnown RBP6.51□□□□□ -1.37
CPNE4-208ENST00000511604 SMIM21Q3B7S5 101 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 KRTCAP3Q53RY4 240 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF761Q86XN6 746 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-208ENST00000511604 SUN3Q8TAQ9 357 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 AQP3Q92482 292 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 BCL2L2Q92843 193 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-208ENST00000511604 DNAJA3Q96EY1 480 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 OR10C1Q96KK4 312 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 MS4A10Q96PG2 267 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 LGR4Q9BXB1 951 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 ZMAT3Q9HA38 289 aaKnown RBP6.51□□□□□ -1.37
CPNE4-208ENST00000511604 ZDHHC3Q9NYG2 299 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 IKZF2Q9UKS7 526 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 TICRRQ7Z2Z1 1910 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 UNC80Q8N2C7 3258 aa6.51□□□□□ -1.37
CPNE4-208ENST00000511604 CLEC18AA5D8T8 446 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 AQP7P3A6NL99 342 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 WDR1O75083 606 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR6A2O95222 327 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 FBXO45P0C2W1 286 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 NPPBP16860 134 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 APOBEC1P41238 236 aaKnown RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 RIPPLY3P57055 190 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 PRSS8Q16651 343 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 SLC22A6Q4U2R8 563 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 LHX8Q68G74 356 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 UNQ5815/PRO19632Q6UWF5 114 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 GDF7Q7Z4P5 450 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 CATSPERDQ86XM0 798 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR2L13Q8N349 312 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 CLEC18CQ8NCF0 446 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR2L2Q8NH16 312 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 DOK4Q8TEW6 326 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 TMEM234Q8WY98 164 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 VAMP8Q9BV40 100 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 TUBG2Q9NRH3 451 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 SOHLH2Q9NX45 425 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 SLC5A6Q9Y289 635 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 TRAV27A0A087WT01 109 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 LOC102724200A0A096LPH7 203 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 A0A1B0GU03 582 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 PLPP1O14494 284 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 ATXN7O15265 892 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 YPEL1O60688 119 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR2T7P0C7T2 308 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 C8orf89P0DMQ9 161 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 RPS20P60866 119 aaKnown RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 CCL20P78556 96 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 IL24Q13007 206 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 IL15RAQ13261 267 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 LASP1Q14847 261 aaKnown RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 Q499Y3 187 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OTPQ5XKR4 325 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 MDGA2Q7Z553 956 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 RTN4RL1Q86UN2 441 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF584Q8IVC4 421 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR2M7Q8NG81 312 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR2T27Q8NH04 317 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 OR10AC1Q8NH08 325 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 FAM213BQ8TBF2 198 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 RPS4Y2Q8TD47 263 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 C2orf15Q8WU43 125 aaKnown RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 DYRK2Q92630 601 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 RNF166Q96A37 237 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 PINX1Q96BK5 328 aaKnown RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 CTHRC1Q96CG8 243 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 LOXL4Q96JB6 756 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 C2orf50Q96LR7 162 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 YPEL2Q96QA6 119 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 ZDHHC6Q9H6R6 413 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 MRPL22Q9NWU5 206 aaKnown RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF581Q9P0T4 197 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 KLK13Q9UKR3 277 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 LAMTOR2Q9Y2Q5 125 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 WSB1Q9Y6I7 421 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 TRIP12Q14669 1992 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-208ENST00000511604 NLRC5Q86WI3 1866 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 DOCK6Q96HP0 2047 aa6.5□□□□□ -1.37
CPNE4-208ENST00000511604 TRAV8-7A0A075B6U6 113 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 SMIM35A0A1B0GVV1 85 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 VSTM2BA6NLU5 285 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 RIIAD1A6NNX1 92 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 DNAJB6O75190 326 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 TRAPPC6AO75865 159 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 STAG3L3P0CL85 134 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 BMP5P22003 454 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 SLC11A1P49279 550 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 TAS2R31P59538 309 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 TPTE2P1Q5T6R2 138 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 PRR27Q6MZM9 219 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF627Q7L945 461 aa6.49□□□□□ -1.37
CPNE4-208ENST00000511604 FAM89BQ8N5H3 189 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms