RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CUBNO60494 3623 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 HIVEP2P31629 2446 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 YLPM1P49750 1951 aaKnown RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 IGLV3-9A0A075B6K5 115 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 A0A087WWL8 130 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 TCRBV3S1A0A5B6 114 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 PLSCR5A0PG75 271 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ZSCAN5BA6NJL1 495 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 C17orf100A8MU93 164 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 H0YL77 283 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 H3BN98 237 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ZNF593O00488 134 aaPredicted RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 BHLHE40O14503 412 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ARPC3O15145 178 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 MITFO75030 526 aaPredicted RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 FKBP6O75344 327 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 E2F6O75461 281 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CRLF1O75462 422 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 NDUFB8O95169 186 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 IGHV1-46P01743 117 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 LCATP04180 440 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 FGF2P09038 288 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CSF3P09919 207 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 SBK2P0C263 348 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ZNF823P16415 610 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ZNF23P17027 643 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ANOS1P23352 680 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 GIFP27352 417 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CRABP1P29762 137 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 GGT2P36268 569 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 MMP15P51511 669 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ARHGDIAP52565 204 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 HCCSP53701 268 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 TMEM33P57088 247 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 LSM6P62312 80 aaKnown RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 HIST1H3AP68431 136 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CBX1P83916 185 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 SCRN3Q0VDG4 424 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 AQP6Q13520 282 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CRMP1Q14194 572 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 FLOT2Q14254 428 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 GINS1Q14691 196 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 SLC36A3Q495N2 470 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 DNAL1Q4LDG9 190 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 C6orf52Q5T4I8 152 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ATPAF1Q5TC12 328 aaPredicted RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 HIST2H3PS2Q5TEC6 136 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR2T2Q6IF00 324 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ARL9Q6T311 187 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 Q6ZR03 302 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 HIST2H3AQ71DI3 136 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 FAM57BQ71RH2 274 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 AQP12AQ8IXF9 295 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 LINC00471Q8N535 108 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ZNF540Q8NDQ6 660 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 BHLHE23Q8NDY6 225 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 GJC3Q8NFK1 279 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR2Z1Q8NG97 314 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR10G2Q8NGC3 310 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR52L1Q8NGH7 329 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR6K6Q8NGW6 343 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR2AJ1Q8NGZ0 328 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CCL17Q92583 94 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 RDH5Q92781 318 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 PTP4A1Q93096 173 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 HAVCR1Q96D42 359 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 HCAR1Q9BXC0 346 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 BEX2Q9BXY8 128 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 DGCR6LQ9BY27 220 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 OR51V1Q9H2C8 321 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 MUC13Q9H3R2 512 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CHODLQ9H9P2 273 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ELOVL3Q9HB03 270 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 NTN4Q9HB63 628 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 TRIM36Q9NQ86 728 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 KRT84Q9NSB2 600 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 ZNF275Q9NSD4 429 aaPredicted RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 CENPMQ9NSP4 180 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 DCAF16Q9NXF7 216 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 SLCO1C1Q9NYB5 712 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 IL20Q9NYY1 176 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 CYB5R1Q9UHQ9 305 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 KLHL21Q9UJP4 597 aa3.82□□□□□ -1.8
NUP54-206ENST00000508465 PURGQ9UJV8 347 aaKnown RBP3.82□□□□□ -1.8
NUP54-206ENST00000508465 IGHV1-69-2A0A0G2JMI3 117 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 LOC102723971A0A1B0GUV8 181 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 RIIAD1A6NNX1 92 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 FAM157AC9JC47 383 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 M0R129 80 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 NDUFS8O00217 210 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 SPRY2O43597 315 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 TLX2O43763 284 aaPredicted RBP3.81□□□□□ -1.8
NUP54-206ENST00000508465 LMX1BO60663 402 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 RP2O75695 350 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 HLA-DPB1P04440 258 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 SPARCP09486 303 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 TACSTD2P09758 323 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 ACSM4P0C7M7 580 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 COX5BP10606 129 aa3.81□□□□□ -1.8
NUP54-206ENST00000508465 SLC2A1P11166 492 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms