RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TRIM36Q9NQ86 728 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF586Q9NXT0 402 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 MRPL15Q9P015 296 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 CGGBP1Q9UFW8 167 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 HELZP42694 1942 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 IGHV2-26A0A0B4J1V2 119 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 IGLC7A0M8Q6 106 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 NPIPB15A6NHN6 443 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 YDJCA8MPS7 323 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 P2RX6O15547 441 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 B4GALT3O60512 393 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PQBP1O60828 265 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 CNMDO75829 334 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 TYMSP04818 313 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SNRPBP14678 240 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SDHBP21912 280 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PRPH2P23942 346 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 LBX1P52954 281 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SLC25A1P53007 311 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 ZXDBP98169 803 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OPN5Q6U736 354 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 MRGPRGQ86SM5 289 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 ST6GALNAC3Q8NDV1 305 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OR5K2Q8NHB8 316 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SUN3Q8TAQ9 357 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 ADAMTS15Q8TE58 950 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 DCUN1D4Q92564 292 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 CAPNS2Q96L46 248 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 HARBI1Q96MB7 349 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF607Q96SK3 696 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PSMG3Q9BT73 122 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 RNF126Q9BV68 326 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OR11A1Q9GZK7 315 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 EIF5A2Q9GZV4 153 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SLC13A4Q9UKG4 626 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PILRBQ9UKJ0 227 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 UBE2J1Q9Y385 318 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 COL11A1P12107 1806 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 RALGAPA2Q2PPJ7 1873 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 IGLON5A6NGN9 336 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF727A8MUV8 499 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 GPR39O43194 453 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PET100P0DJ07 73 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 AKR1C4P17516 323 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 C18orf21Q32NC0 220 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 TRMT12Q53H54 448 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SPIN3Q5JUX0 258 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 KIAA0895LQ68EN5 471 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 WDR74Q6RFH5 385 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 AMZ2Q86W34 360 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OR6T1Q8NGN1 323 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OR2T27Q8NH04 317 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 ABHD4Q8TB40 342 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 SLC25A43Q8WUT9 341 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PGLYRP2Q96PD5 576 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 OR6C1Q96RD1 312 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 MACROD1Q9BQ69 325 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 PHF7Q9BWX1 381 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 CSAG2Q9Y5P2 127 aa9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 GREB1LQ9C091 1923 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-210ENST00000508216 EDDM13A0A1B0GTR0 161 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 OR2AG2A6NM03 316 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF891A8MT65 544 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 E5RGE8 158 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 GCM2O75603 506 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 CSN2P05814 226 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 CTSEP14091 401 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 PRDX3P30048 256 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 SMIM11AP58511 58 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 RPL38P63173 70 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 AESQ08117 197 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 PMPCAQ10713 525 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 INSL4Q14641 139 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 PCBP2Q15366 365 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF699Q32M78 642 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 ACTL10Q5JWF8 245 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 LYPLAL1Q5VWZ2 237 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 CARD17Q5XLA6 110 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 NIPAL3Q6P499 406 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 TOMM20LQ6UXN7 152 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 LHFPL2Q6ZUX7 228 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 ACOT1Q86TX2 421 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 DNAJB3Q8WWF6 145 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 PPP1R14AQ96A00 147 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 PTX4Q96A99 478 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 DDIT4LQ96D03 193 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 SLC35G5Q96KT7 338 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 GPR21Q99679 349 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 POLR2J3Q9H1A7 115 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 A4GALTQ9NPC4 353 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 SLC7A10Q9NS82 523 aa9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 OSER1Q9NX31 292 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms