RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TECTBQ96PL2 329 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 APOL4Q9BPW4 351 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 FGF23Q9GZV9 251 aaPredicted RBP15.31■□□□□ 0.04
HOXD11-202ENST00000498438 ERVK-18Q9QC07 812 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 NUFIP1Q9UHK0 495 aaKnown RBP15.31■□□□□ 0.04
HOXD11-202ENST00000498438 NUP50Q9UKX7 468 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 GTF2A1LQ9UNN4 478 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF816-ZNF321PA0A0X1KG74 233 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 CDIPTO14735 213 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 NDUFA2O43678 99 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 SRSF10O75494 262 aaKnown RBP15.3■□□□□ 0.04
HOXD11-202ENST00000498438 FPR2P25090 351 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 MAP2K3P46734 347 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 NPY4RP50391 375 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 POU4F2Q12837 409 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 ZFP1Q6P2D0 407 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 PLEKHG7Q6ZR37 379 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 KCTD8Q6ZWB6 473 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 OR8J1Q8NGP2 316 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 PPP1R14AQ96A00 147 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 FAM71F1Q96KD3 344 aaPredicted RBP15.3■□□□□ 0.04
HOXD11-202ENST00000498438 SMURF1Q9HCE7 757 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 GPR84Q9NQS5 396 aa15.3■□□□□ 0.04
HOXD11-202ENST00000498438 WARS2Q9UGM6 360 aaKnown RBP15.3■□□□□ 0.04
HOXD11-202ENST00000498438 KIR2DS1A0A191URI9 304 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 TMEM210A6NLX4 147 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 LOC110117498-PIK3R3F6TDL0 507 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.29■□□□□ 0.04
HOXD11-202ENST00000498438 EI24O14681 340 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 ENSAO43768 121 aaKnown RBP15.29■□□□□ 0.04
HOXD11-202ENST00000498438 APOL3O95236 402 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 IGLV3-1P01715 115 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 ALPLP05186 524 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 HTR1FP30939 366 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 CDC42P60953 191 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 MICBQ29980 383 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 SSX6Q7RTT6 188 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 ZFAND2BQ8WV99 257 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 RPL3LQ92901 407 aaKnown RBP15.29■□□□□ 0.04
HOXD11-202ENST00000498438 RNF170Q96K19 258 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 JMJD8Q96S16 334 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 TBX5Q99593 518 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 MOB1AQ9H8S9 216 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF69Q9UC07 566 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 MRM2Q9UI43 246 aaKnown RBP15.29■□□□□ 0.04
HOXD11-202ENST00000498438 R4GMQ9 66 aa15.29■□□□□ 0.04
HOXD11-202ENST00000498438 IGHV3OR16-10A0A075B7F0 116 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 SRRM5B3KS81 715 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 EBAG9O00559 213 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 TTRP02766 147 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 PPIAL4GP0DN37 164 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 IGHV4-38-2P0DP08 117 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 MUC1P15941 1255 aaPredicted RBP15.28■□□□□ 0.04
HOXD11-202ENST00000498438 CFHR2P36980 270 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 GPM6AP51674 278 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 EGR3Q06889 387 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 BCL2L15Q5TBC7 163 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 SCCPDHQ8NBX0 429 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 UPRTQ96BW1 309 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 SEH1LQ96EE3 360 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 HIST1H2AAQ96QV6 131 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 RASSF4Q9H2L5 321 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 USE1Q9NZ43 259 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 PIGLQ9Y2B2 252 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 ORC6Q9Y5N6 252 aa15.28■□□□□ 0.04
HOXD11-202ENST00000498438 TRAV40A0A0B4J280 105 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 A0A1W2PQL4 384 aaPredicted RBP15.27■□□□□ 0.04
HOXD11-202ENST00000498438 TMPRSS2O15393 492 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 FCN3O75636 299 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 ATP6V1B1P15313 513 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 FAHP16930 419 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 ALDH3A2P51648 485 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 GMFBP60983 142 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 FGF12P61328 243 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 ELF3P78545 371 aaPredicted RBP15.27■□□□□ 0.04
HOXD11-202ENST00000498438 RIPPLY1Q0D2K3 151 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 FAM76BQ5HYJ3 339 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 DMRTC1Q5HYR2 192 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 WDR38Q5JTN6 314 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 CEP78Q5JTW2 689 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 CD276Q5ZPR3 534 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 KRT74Q7RTS7 529 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 THAP5Q7Z6K1 395 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 BCL6BQ8N143 479 aaPredicted RBP15.27■□□□□ 0.04
HOXD11-202ENST00000498438 SIGLECL1Q8N7X8 197 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 OR10H4Q8NGA5 316 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 OR10Z1Q8NGY1 313 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 ITFG2Q969R8 447 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 EME1Q96AY2 570 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 ESM1Q9NQ30 184 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 IMPAD1Q9NX62 359 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 KAAG1Q9UBP8 84 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 OR52A1Q9UKL2 312 aa15.27■□□□□ 0.04
HOXD11-202ENST00000498438 A0A1B0GW55 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 TRIM77I1YAP6 450 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DVL1O14640 695 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DHRS3O75911 302 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 RPP14O95059 124 aaKnown RBP15.26■□□□□ 0.03
HOXD11-202ENST00000498438 KRT8P05787 483 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 OR2T7P0C7T2 308 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms