RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 PPP1R3EQ9H7J1 279 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 SCPEP1Q9HB40 452 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 RHOFQ9HBH0 211 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 PTTG3PQ9NZH4 202 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 Q9UFV3 132 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 NDRG3Q9UGV2 375 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 GPR160Q9UJ42 338 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 TINAGQ9UJW2 476 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 MRPS28Q9Y2Q9 187 aaKnown RBP7.31□□□□□ -1.24
SF3A1-210ENST00000498259 SLC25A15Q9Y619 301 aa7.31□□□□□ -1.24
SF3A1-210ENST00000498259 FRYQ5TBA9 3013 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 A0A0G2JMP0 313 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 A0A0X1KG70 313 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 A6NIN4 97 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CD300LBA8K4G0 201 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CCL21O00585 134 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ZNHIT1O43257 154 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CTAG2O75638 210 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 RBBP9O75884 186 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM225BP0DP42 221 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 GTF2F2P13984 249 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CPT2P23786 658 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 PTAFRP25105 342 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ASCL1P50553 236 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CLDN12P56749 244 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ACTBP60709 375 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ACTG1P63261 375 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 RSU1Q15404 277 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 UBE2V2Q15819 145 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF79Q15937 498 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 STEAP3Q658P3 488 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF57Q68EA5 555 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF474Q6S9Z5 364 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-210ENST00000498259 GLIPR1L1Q6UWM5 242 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF573Q86YE8 665 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 LYSMD2Q8IV50 215 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 SAXO1Q8IYX7 474 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 TOMM5Q8N4H5 51 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 NAXEQ8NCW5 288 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 PXT1Q8NFP0 134 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 OR4M2Q8NGB6 313 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 OR1J1Q8NGS3 322 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 OR5H6Q8NGV6 325 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 OR8S1Q8NH09 359 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CHPT1Q8WUD6 406 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 TNFAIP8L1Q8WVP5 186 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 SLC25A28Q96A46 364 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 S100PBPQ96BU1 408 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 RADILQ96JH8 1075 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF75AQ96N20 296 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 RTL8AQ9BWD3 113 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM59Q9BXS4 323 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ELL3Q9HB65 397 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-210ENST00000498259 JKAMPQ9P055 326 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 COPZ2Q9P299 210 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CGGBP1Q9UFW8 167 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-210ENST00000498259 SH3BGRL2Q9UJC5 107 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 ING4Q9UNL4 249 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 STARD10Q9Y365 291 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 SPTBN2O15020 2390 aa7.3□□□□□ -1.24
SF3A1-210ENST00000498259 DCHS1Q96JQ0 3298 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM272A0A1B0GTI8 110 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 FAM230AA0A1W2PPH8 454 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF503-AS2A6NEH8 195 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 NAP1L6A6NFF2 107 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 LMX1BO60663 402 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 SMPD2O60906 423 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 CRTAPO75718 401 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-210ENST00000498259 HLA-DQB1P01920 261 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 CECR9P0C854 216 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 CCL2P13500 99 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF35P13682 527 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 CDK2P24941 298 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ACKR3P25106 362 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 PRSS3P35030 304 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 RCVRNP35243 200 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 GNG3P63215 75 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 MRPS15P82914 257 aaKnown RBP7.29□□□□□ -1.24
SF3A1-210ENST00000498259 HGFACQ04756 655 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 PRDX4Q13162 271 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ASAH1Q13510 395 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 TAB1Q15750 504 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ASPHD2Q6ICH7 369 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 RGS7BPQ6MZT1 257 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-210ENST00000498259 SEZ6L2Q6UXD5 910 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 LYPD6Q86Y78 171 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 Q8IYB0 196 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 OR5AS1Q8N127 324 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 OR56B2PQ8NGI1 322 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ENKURQ8TC29 256 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 SMIM4Q8WVI0 70 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 DMRTA2Q96SC8 542 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 PLK3Q9H4B4 646 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 NOX3Q9HBY0 568 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 GPR173Q9NS66 373 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM100Q9NV29 134 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 C14orf119Q9NWQ9 140 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms