RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 RNF170Q96K19 258 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 FAM71F1Q96KD3 344 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-211ENST00000494800 TECTBQ96PL2 329 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 TBX5Q99593 518 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 GPR84Q9NQS5 396 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 ENPP5Q9UJA9 477 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 OR52A1Q9UKL2 312 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 CUBNO60494 3623 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 PRR32B1ATL7 298 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 CDIPTO14735 213 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 ADAM20O43506 726 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 DHRS3O75911 302 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 LHBP01229 141 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 MUC1P15941 1255 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-211ENST00000494800 PSMB10P40306 273 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 ZIK1Q3SY52 487 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-211ENST00000494800 C1orf229Q6ZS94 237 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-211ENST00000494800 ZBTB49Q6ZSB9 765 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 FAM220AQ7Z4H9 259 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 PQLC1Q8N2U9 271 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 BPIFB2Q8N4F0 458 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 RAB40AQ8WXH6 277 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 JMJD8Q96S16 334 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 SUCNR1Q9BXA5 334 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 TLNRD1Q9H1K6 362 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 OPN4Q9UHM6 478 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 PIGLQ9Y2B2 252 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 GMPPBQ9Y5P6 360 aa14.73□□□□□ -0.05
HDAC4-211ENST00000494800 IGHV2-70DA0A0C4DH43 119 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 A0A1W2PQL4 384 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 METTL15A6NJ78 407 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 SULT1C4O75897 302 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 RPP14O95059 124 aaKnown RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 BAG2O95816 211 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 MTNR1AP48039 350 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 SNRPGP62308 76 aaKnown RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 GNG3P63215 75 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 CSNK2BP67870 215 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 ACTC1P68032 377 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 ACTA1P68133 377 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 MFGE8Q08431 387 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 SLC25A30Q5SVS4 291 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 TEX36Q5VZQ5 186 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 WDR25Q64LD2 544 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 LYPD2Q6UXB3 125 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 WDR82Q6UXN9 313 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 PLEKHG7Q6ZR37 379 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 WDR86Q86TI4 376 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 ELMOD2Q8IZ81 293 aa14.72□□□□□ -0.05
HDAC4-211ENST00000494800 C12orf43Q96C57 262 aaKnown RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 MYCBPQ99417 103 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 MRM2Q9UI43 246 aaKnown RBP14.72□□□□□ -0.05
HDAC4-211ENST00000494800 ATRQ13535 2644 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 FBN1P35555 2871 aaKnown RBP14.71□□□□□ -0.05
HDAC4-211ENST00000494800 OR5B21A6NL26 309 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 ENSAO43768 121 aaKnown RBP14.71□□□□□ -0.05
HDAC4-211ENST00000494800 MPZL2O60487 215 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 APOL3O95236 402 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 IGLV3-1P01715 115 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 GYPAP02724 150 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 TTRP02766 147 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 PPIAL4GP0DN37 164 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 CFHR2P36980 270 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 CEACAM21Q3KPI0 293 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF684Q5T5D7 378 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 PLCXD3Q63HM9 321 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 KRT74Q7RTS7 529 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 SLC36A1Q7Z2H8 476 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 C11orf53Q8IXP5 236 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 OR5A2Q8NGI9 324 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 OR10Z1Q8NGY1 313 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 Q96MT0 163 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 NUDT16L1Q9BRJ7 211 aaKnown RBP14.71□□□□□ -0.05
HDAC4-211ENST00000494800 ADI1Q9BV57 179 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 PPP1R3EQ9H7J1 279 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 PLEKHA1Q9HB21 404 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 DNAJB11Q9UBS4 358 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 PCDHGB1Q9Y5G3 927 aa14.71□□□□□ -0.05
HDAC4-211ENST00000494800 KIR2DS1A0A191URI9 304 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 DHRS7CA6NNS2 312 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 TMPRSS2O15393 492 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 MAGEB4O15481 346 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-211ENST00000494800 ENTPD6O75354 484 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 SRSF10O75494 262 aaKnown RBP14.7□□□□□ -0.06
HDAC4-211ENST00000494800 LIPFP07098 398 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 GPM6AP51674 278 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 PAX8Q06710 450 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 OCLNQ16625 522 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 ZSCAN26Q16670 478 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 C11orf91Q3C1V1 193 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 KRTAP24-1Q3LI83 254 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 FAM76BQ5HYJ3 339 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 CEP78Q5JTW2 689 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 RBMS3Q6XE24 437 aaKnown RBP14.7□□□□□ -0.06
HDAC4-211ENST00000494800 USP43Q70EL4 1123 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 MOB3CQ70IA8 216 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 DOK3Q7L591 496 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 FAM90A1Q86YD7 464 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 PHC2Q8IXK0 858 aa14.7□□□□□ -0.06
HDAC4-211ENST00000494800 SCCPDHQ8NBX0 429 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms