RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CCL1P22362 96 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 CD200P41217 278 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 GPR6P46095 362 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-219ENST00000488186 CLVS2Q5SYC1 327 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 RNLSQ5VYX0 342 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 PLCXD3Q63HM9 321 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 MOGAT3Q86VF5 341 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 CELF2-AS1Q8N7Q2 184 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 PLPP7Q8NBV4 271 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 OR13C3Q8NGS6 347 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 OR11L1Q8NGX0 322 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 RNF166Q96A37 237 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-219ENST00000488186 TIMD4Q96H15 378 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 RNF170Q96K19 258 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 PDCD1LG2Q9BQ51 273 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 CDCA4Q9BXL8 241 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 ZNF275Q9NSD4 429 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-219ENST00000488186 UFSP2Q9NUQ7 469 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 PAK1IP1Q9NWT1 392 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-219ENST00000488186 UBAP1Q9NZ09 502 aa13.33□□□□□ -0.28
C9orf3-219ENST00000488186 TEP1Q99973 2627 aaKnown RBP13.32□□□□□ -0.28
C9orf3-219ENST00000488186 IGHV4-30-2A0A087WSY4 118 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 A0A1B0GWJ7 208 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 TRIM64A6NGJ6 449 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 A6NLC8 198 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 MT-ND2P03891 347 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 OCM2P0CE71 109 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 OCMP0CE72 109 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-219ENST00000488186 CDK5R1Q15078 307 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 MED22Q15528 200 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 CEP78Q5JTW2 689 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 PRSS48Q7RTY5 328 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 TSEN15Q8WW01 171 aaKnown RBP13.32□□□□□ -0.28
C9orf3-219ENST00000488186 SGCDQ92629 289 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 HPS1Q92902 700 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 RAB1CQ92928 201 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 ERGIC1Q969X5 290 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 GCM1Q9NP62 436 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 GPR173Q9NS66 373 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 SLC7A11Q9UPY5 501 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 DHDHQ9UQ10 334 aa13.32□□□□□ -0.28
C9orf3-219ENST00000488186 MTORP42345 2549 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 PNMA8CA0A1B0GUJ8 204 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 hCG_1807616A0A1W2PRN6 198 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 SMAD7O15105 426 aaKnown RBP13.31□□□□□ -0.28
C9orf3-219ENST00000488186 OGG1O15527 345 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 GATBO75879 557 aaKnown RBP13.31□□□□□ -0.28
C9orf3-219ENST00000488186 ZFPL1O95159 310 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 NR4A2P43354 598 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 MAB21L1Q13394 359 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 CEACAM21Q3KPI0 293 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 SPRNQ5BIV9 151 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 PRAMEF6Q5VXH4 476 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 LURAP1LQ8IV03 231 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 C1orf87Q8N0U7 546 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 ZNF420Q8TAQ5 688 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-219ENST00000488186 OR5P3Q8WZ94 311 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 FGGYQ96C11 551 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 C10orf35Q96D05 121 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 REG4Q9BYZ8 158 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 CACNG2Q9Y698 323 aa13.31□□□□□ -0.28
C9orf3-219ENST00000488186 LOC100289279A0A1B0GTE1 492 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 ANKRD61A6NGH8 418 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 ZNF732B4DXR9 585 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 CD99P14209 185 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 CELP19835 753 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 GIFP27352 417 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 GATA4P43694 442 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 GPM6AP51674 278 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 GABARAPL2P60520 117 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 GNG3P63215 75 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 SPHARQ15513 63 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 XAF1Q6GPH4 301 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 Q6ZSR3 168 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 ZFP41Q8N8Y5 198 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 OR1M1Q8NGA1 313 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 OR5A2Q8NGI9 324 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 GPR148Q8TDV2 347 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 PP6455Q8WZ26 134 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 ITPKCQ96DU7 683 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 SMIM19Q96E16 107 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 BPESC1Q9GZL8 116 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 PPP1R3EQ9H7J1 279 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 NEK6Q9HC98 313 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 C1orf123Q9NWV4 160 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 ZNF281Q9Y2X9 895 aa13.3□□□□□ -0.28
C9orf3-219ENST00000488186 ISPDA4D126 451 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 TMEM210A6NLX4 147 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 H7C1Q1 480 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 LMX1BO60663 402 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 MRPS14O60783 128 aaKnown RBP13.29□□□□□ -0.28
C9orf3-219ENST00000488186 RP2O75695 350 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 LALBAP00709 142 aa13.29□□□□□ -0.28
C9orf3-219ENST00000488186 CD2P06729 351 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms