RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 MRM2Q9UI43 246 aaKnown RBP8.59□□□□□ -1.03
NEK4-204ENST00000487068 PIGLQ9Y2B2 252 aa8.59□□□□□ -1.03
NEK4-204ENST00000487068 RHBDD3Q9Y3P4 386 aa8.59□□□□□ -1.03
NEK4-204ENST00000487068 PPIAL4AQ9Y536 164 aa8.59□□□□□ -1.03
NEK4-204ENST00000487068 MPC1Q9Y5U8 109 aa8.59□□□□□ -1.03
NEK4-204ENST00000487068 CEACAM18A8MTB9 384 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 P2RY10O00398 339 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PLPP2O43688 288 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 FOXH1O75593 365 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 DHRS3O75911 302 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 CLIC3O95833 236 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PNPP00491 289 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 IFNA2P01563 188 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PSMB10P40306 273 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 ACTA2P62736 377 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 GNB2P62879 340 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 ACTG2P63267 376 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 CSNK2BP67870 215 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 ZNF85Q03923 595 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 RIPPLY1Q0D2K3 151 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 KCNJ8Q15842 424 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 ZNF181Q2M3W8 571 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 LIPNQ5VXI9 398 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 SFRP4Q6FHJ7 346 aaPredicted RBP8.58□□□□□ -1.04
NEK4-204ENST00000487068 ZNF826PQ6ZT77 177 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 MOB3CQ70IA8 216 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 DHRSXQ8N5I4 330 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 ACBD7Q8N6N7 88 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PACRGLQ8N7B6 248 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 SETD9Q8NE22 299 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 OR8B3Q8NGG8 313 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 LRRC29Q8WV35 223 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PPP1R14AQ96A00 147 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 RNF170Q96K19 258 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 TECTBQ96PL2 329 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 OR8B2Q96RD0 313 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 MYCBPQ99417 103 aaPredicted RBP8.58□□□□□ -1.04
NEK4-204ENST00000487068 PPP1R3EQ9H7J1 279 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PATZ1Q9HBE1 687 aaKnown RBP8.58□□□□□ -1.04
NEK4-204ENST00000487068 AMBNQ9NP70 447 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 TMEM160Q9NX00 188 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 ENPP5Q9UJA9 477 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 PCDHGB1Q9Y5G3 927 aa8.58□□□□□ -1.04
NEK4-204ENST00000487068 A0A1B0GWJ7 208 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 TMEM210A6NLX4 147 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 PHF1O43189 567 aaPredicted RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 SYT7O43581 403 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 SULT1C4O75897 302 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 FADS2O95864 444 aaKnown RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 HTR1AP08908 422 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 ATP6V1B1P15313 513 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 PMELP40967 661 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 GPM6AP51674 278 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 SEC61A1P61619 476 aaKnown RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 HOXA4Q00056 320 aaPredicted RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 ZNF154Q13106 437 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 ZNF404Q494X3 552 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 DMRTC1Q5HYR2 192 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 SLC25A30Q5SVS4 291 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 ZNF684Q5T5D7 378 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 TTC23Q5W5X9 447 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 DOK3Q7L591 496 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 LRRC28Q86X40 367 aaPredicted RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 ELMOD2Q8IZ81 293 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 OR1M1Q8NGA1 313 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 CNIH3Q8TBE1 160 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 Q8TCH9 128 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 TMEM158Q8WZ71 300 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 LGALS12Q96DT0 336 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 NEIL1Q96FI4 390 aaPredicted RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 C1orf159Q96HA4 380 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 C4orf36Q96KX1 117 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 TMEM246Q9BRR3 403 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 ALG8Q9BVK2 526 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 SSBP3Q9BWW4 388 aaPredicted RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 DCLRE1BQ9H816 532 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 TRIM36Q9NQ86 728 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 G6PC2Q9NQR9 355 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 DNAJB11Q9UBS4 358 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 MIOXQ9UGB7 285 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 SLC22A13Q9Y226 551 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 LRCH1Q9Y2L9 728 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 RPL36Q9Y3U8 105 aaKnown RBP8.57□□□□□ -1.04
NEK4-204ENST00000487068 ATRQ13535 2644 aa8.57□□□□□ -1.04
NEK4-204ENST00000487068 IGHV3OR15-7A0A075B7D8 119 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 LOC107986453A0A1B0GWG9 222 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 OOEPA6NGQ2 149 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 A6NIN4 97 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 ZNF732B4DXR9 585 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 J3QLW9 94 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 LGALS8O00214 317 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 CDIPTO14735 213 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 SLC16A6O15403 523 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 ADAM20O43506 726 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 SRSF10O75494 262 aaKnown RBP8.56□□□□□ -1.04
NEK4-204ENST00000487068 CST4P01036 141 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 OCM2P0CE71 109 aa8.56□□□□□ -1.04
NEK4-204ENST00000487068 OCMP0CE72 109 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms