RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 TIFABQ6ZNK6 161 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 ABHD13Q7L211 337 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 NDUFAF7Q7L592 441 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 PLPP5Q8NEB5 264 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RHOXF1Q8NHV9 184 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 MUC7Q8TAX7 377 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SLC41A3Q96GZ6 507 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SMIM10Q96HG1 83 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 ZBTB18Q99592 522 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 CITED1Q99966 193 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 TMEM43Q9BTV4 400 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 DEFB127Q9H1M4 99 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RHBGQ9H310 441 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 CDC42EP4Q9H3Q1 356 aaKnown RBP3.97□□□□□ -1.77
UPF3A-205ENST00000479712 IKZF5Q9H5V7 419 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 CAB39LQ9H9S4 337 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 C3orf18Q9UK00 162 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RABL2BQ9UNT1 228 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SLC22A14Q9Y267 594 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RRP15Q9Y3B9 282 aaKnown RBP3.97□□□□□ -1.77
UPF3A-205ENST00000479712 MMACHCQ9Y4U1 282 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 ARHGAP21Q5T5U3 1957 aa3.96□□□□□ -1.77
UPF3A-205ENST00000479712 IGHV1-45A0A0A0MS14 117 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 NSG1A0A0A6YYJ2 146 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 LRP5LA4QPB2 252 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 TRIM64CA6NLI5 447 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 TAPBPO15533 448 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SCELO95171 688 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 C2P06681 752 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SNRPAP09012 282 aaKnown RBP3.96□□□□□ -1.78
UPF3A-205ENST00000479712 DBTP11182 482 aaKnown RBP3.96□□□□□ -1.78
UPF3A-205ENST00000479712 COX6A1P12074 109 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 RNH1P13489 461 aaKnown RBP3.96□□□□□ -1.78
UPF3A-205ENST00000479712 PCMT1P22061 227 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 GATA2P23769 480 aaPredicted RBP3.96□□□□□ -1.78
UPF3A-205ENST00000479712 CD80P33681 288 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 P2RY1P47900 373 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 NAA20P61599 178 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 RPL32P62910 135 aaKnown RBP3.96□□□□□ -1.78
UPF3A-205ENST00000479712 CD47Q08722 323 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 FGL1Q08830 312 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 BIKQ13323 160 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 ZMYND11Q15326 602 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 OR4D1Q15615 310 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 Q1RN00 199 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 C1orf185Q5T7R7 199 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SLC22A10Q63ZE4 541 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 ZFAND6Q6FIF0 208 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 H3F3CQ6NXT2 135 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 CMC1Q7Z7K0 106 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 PRSS58Q8IYP2 241 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 MTURNQ8N3F0 131 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SVOPLQ8N434 492 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF740Q8NDX6 193 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 BHLHE23Q8NDY6 225 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 OR2L5Q8NG80 312 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 OR51Q1Q8NH59 317 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 ACMSDQ8TDX5 336 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 IMMP1LQ96LU5 166 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SPNS1Q9H2V7 528 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 GLIPR2Q9H4G4 154 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 NANSQ9NR45 359 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 KLHL28Q9NXS3 571 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SIGLEC8Q9NYZ4 499 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 IL36GQ9NZH8 169 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 CD274Q9NZQ7 290 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 SPRR3Q9UBC9 169 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 OPTCQ9UBM4 332 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 RASD1Q9Y272 281 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 NAALAD2Q9Y3Q0 740 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 PPIAL4AQ9Y536 164 aa3.96□□□□□ -1.78
UPF3A-205ENST00000479712 TRAV26-1A0A087WT03 109 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 IGKV3D-11A0A0A0MRZ8 115 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 IGHV3-35A0A0C4DH35 117 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 IGHV2-70DA0A0C4DH43 119 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 EXOC1LA0A1B0GW35 172 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 B4DXG7 233 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 H0YIV9 168 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 H3BQF6 201 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 FOXE1O00358 373 aaPredicted RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 CHST10O43529 356 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 TSC22D2O75157 780 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 RDH16O75452 317 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 GPX5O75715 221 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 UGT2B17O75795 530 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 PIAS1O75925 651 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 HSMCR30P0CW71 290 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 IL1RNP18510 177 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MDKP21741 143 aaPredicted RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 LOXP28300 417 aaPredicted RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 RPL29P47914 159 aaKnown RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 TNFRSF17Q02223 184 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 OC90Q02509 493 aaPredicted RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 IRF8Q02556 426 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 ASAH1Q13510 395 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 DOC2AQ14183 400 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 GGTLC2Q14390 218 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 C15orf32Q32M92 178 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 DEFB134Q4QY38 66 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 TP53I3Q53FA7 332 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms