RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 RPL36Q9Y3U8 105 aaKnown RBP8.15□□□□□ -1.1
HDAC3-208ENST00000476739 ARHGAP32A7KAX9 2087 aa8.15□□□□□ -1.11
HDAC3-208ENST00000476739 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.11
HDAC3-208ENST00000476739 H0YAE9 185 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 J3QLW9 94 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF701M0R085 212 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-208ENST00000476739 CST4P01036 141 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 TGFAP01135 160 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 IGHV2-5P01817 119 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 FAHP16930 419 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF19P17023 458 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 GZMKP49863 264 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 CDH15P55291 814 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 NANOS3P60323 173 aaKnown RBP8.14□□□□□ -1.11
HDAC3-208ENST00000476739 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
HDAC3-208ENST00000476739 BTG1P62324 171 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 CSNK2BP67870 215 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ACTC1P68032 377 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ACTA1P68133 377 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 SLC3A1Q07837 685 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 RAB40BQ12829 278 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF154Q13106 437 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF181Q2M3W8 571 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 KRT74Q7RTS7 529 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 LRRC28Q86X40 367 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-208ENST00000476739 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 CSNK2A3Q8NEV1 391 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 SEMA6DQ8NFY4 1073 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 OR14K1Q8NGZ2 314 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 OR8S1Q8NH09 359 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 Q8TCH9 128 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 OR5P3Q8WZ94 311 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 TFAP2CQ92754 450 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 PELI1Q96FA3 418 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 TIMD4Q96H15 378 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 C4orf36Q96KX1 117 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 GAL3ST1Q99999 423 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ALG8Q9BVK2 526 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 METTL17Q9H7H0 456 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF665Q9H7R5 613 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 MOB1AQ9H8S9 216 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 LPAR2Q9HBW0 351 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 C1orf123Q9NWV4 160 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ERVK13-1Q9NX77 482 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 FRRS1LQ9P0K9 344 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF391Q9UJN7 358 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 PIGLQ9Y2B2 252 aa8.14□□□□□ -1.11
HDAC3-208ENST00000476739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.13□□□□□ -1.112e-6■■■□□ 15.9
HDAC3-208ENST00000476739 ZNF816-ZNF321PA0A0X1KG74 233 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 A8MV72 311 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 E9PI62 339 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 DHRS3O75911 302 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 FADS2O95864 444 aaKnown RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 LIMS3P0CW19 117 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 LIMS4P0CW20 117 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 EGR1P18146 543 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 CCL1P22362 96 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 GNALP38405 381 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 MAP2K3P46734 347 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 IL18R1Q13478 541 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 GALEQ14376 348 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 SPCS2Q15005 226 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 CEP78Q5JTW2 689 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 SFRP4Q6FHJ7 346 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 Q6ZSR3 168 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 FAM220AQ7Z4H9 259 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 PEG10Q86TG7 708 aaKnown RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 KLBQ86Z14 1044 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 LINC01356Q8N9X3 169 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 SPERTQ8NA61 448 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 MINDY2Q8NBR6 621 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 SETD9Q8NE22 299 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 OR1M1Q8NGA1 313 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 OR2G2Q8NGZ5 317 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 FGF20Q9NP95 211 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 PCDHGB1Q9Y5G3 927 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 MPC1Q9Y5U8 109 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 V9GYS6 101 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 SONP18583 2426 aaKnown RBP8.13□□□□□ -1.11
HDAC3-208ENST00000476739 HIVEP2P31629 2446 aa8.13□□□□□ -1.11
HDAC3-208ENST00000476739 PPIAL4EA0A075B759 164 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-208ENST00000476739 A6NLC8 198 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 PPIAL4DF5H284 164 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 CDIPTO14735 213 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
HDAC3-208ENST00000476739 PLPP2O43688 288 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 XPNPEP2O43895 674 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 TNFAIP8O95379 198 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 PPIAL4FP0DN26 164 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 ZFP36P26651 326 aaKnown RBP8.12□□□□□ -1.11
HDAC3-208ENST00000476739 CD80P33681 288 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 ETV1P50549 477 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 RIPPLY1Q0D2K3 151 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM155Q4W5P6 130 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 KLHL22Q53GT1 634 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 OR2G6Q5TZ20 316 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM42Q69YG0 159 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms