RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 IFNGP01579 166 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 RAP2AP10114 183 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ALOX5APP20292 161 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 SLC2A5P22732 501 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 HSD11B1P28845 292 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 MNAT1P51948 309 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 GMFBP60983 142 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 CDK5Q00535 292 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 DEFA6Q01524 100 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 PDCD1Q15116 288 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OCLNQ16625 522 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 TIGD6Q17RP2 521 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 GFOD2Q3B7J2 385 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 FAM98BQ52LJ0 330 aaKnown RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 METTL11BQ5VVY1 283 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 TMEM236Q5W0B7 351 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OLFML2AQ68BL7 652 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 STUMQ69YW2 141 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ASPHD2Q6ICH7 369 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 HCP5Q6MZN7 132 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 CPOQ8IVL8 374 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ARHGAP24Q8N264 748 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 PNKDQ8N490 385 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 SCCPDHQ8NBX0 429 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OR8B12Q8NGG6 310 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OR52H1Q8NGJ2 320 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OTOSQ8NHW6 89 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ANGPTL6Q8NI99 470 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 GIPC3Q8TF64 312 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 THEM6Q8WUY1 208 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 C17orf50Q8WW18 174 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 SSMEM1Q8WWF3 244 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 DYRK2Q92630 601 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OTULINQ96BN8 352 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 C12orf43Q96C57 262 aaKnown RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ASB9Q96DX5 294 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 RAB3IPQ96QF0 476 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 PKP2Q99959 881 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 DCTN5Q9BTE1 182 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 PAPOLGQ9BWT3 736 aaKnown RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OR10A2Q9H208 303 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 OPA3Q9H6K4 179 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 BEX1Q9HBH7 125 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 TRIM36Q9NQ86 728 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 SIRT7Q9NRC8 400 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 HAO2Q9NYQ3 351 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 DNAJB11Q9UBS4 358 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 PRPF19Q9UMS4 504 aaKnown RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 KPTNQ9Y664 436 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 NOTCH1P46531 2555 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 IGKV1D-17A0A075B6S4 117 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 A0A1B0GUS0 222 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 A0A1B0GVI7 797 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 A0A1W2PRD5 423 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 A0A1W2PRF3 423 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 A0A1W2PRM7 423 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 ARRDC5A6NEK1 342 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PSMD9O00233 223 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 NDUFB3O43676 98 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 GPR137BO60478 399 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 TIPRLO75663 272 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 CLPXO76031 633 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 KNG1P01042 644 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 LYNP07948 512 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 H2BFMP0C1H6 154 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 CALB2P22676 271 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 POU1F1P28069 291 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 NAA10P41227 235 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PROK1P58294 105 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 IL5RAQ01344 420 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 MZT1Q08AG7 82 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PRDX4Q13162 271 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PDLIM3Q53GG5 364 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-207ENST00000475549 METAP1DQ6UB28 335 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF788Q6ZQV5 615 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 Q6ZSV7 163 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 SHFQ7M4L6 423 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 LDLRAD3Q86YD5 345 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 C11orf42Q8N5U0 333 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 ZSCAN4Q8NAM6 433 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-207ENST00000475549 CSNK2A3Q8NEV1 391 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 OR4F5Q8NH21 305 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 C8orf46Q8TAG6 207 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PPP1R35Q8TAP8 253 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 TEX47Q8TBZ9 253 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 TBC1D15Q8TC07 691 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PIGCQ92535 297 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 CCDC124Q96CT7 223 aaKnown RBP5.75□□□□□ -1.49
HDAC3-207ENST00000475549 PGAM5Q96HS1 289 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 RNF170Q96K19 258 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 GAFA1Q96PS6 74 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 C1orf21Q9H246 121 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 OR51I2Q9H344 312 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 MUC13Q9H3R2 512 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 RGCCQ9H4X1 137 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 ELL3Q9HB65 397 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-207ENST00000475549 FAM206AQ9NX38 181 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF391Q9UJN7 358 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF222Q9UK12 451 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 MAB21L2Q9Y586 359 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms