RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CT45A9P0DMV2 189 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 LMO1P25800 156 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CD1BP29016 333 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ARL2P36404 184 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ELLP55199 621 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 RAB11AP62491 216 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 GPNMBQ14956 572 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NSDHLQ15738 373 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CT45A2Q5DJT8 189 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM72AQ5TYM5 149 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 C9orf135Q5VTT2 229 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM72DQ6L9T8 149 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 DNM1P34Q6PK57 102 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PET117Q6UWS5 81 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM72BQ86X60 149 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SYT12Q8IV01 421 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CLECL1Q8IZS7 167 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 STPG4Q8N801 248 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 LINC01356Q8N9X3 169 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC38A9Q8NBW4 561 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 GPR146Q96CH1 333 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SEH1LQ96EE3 360 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PGLYRP3Q96LB9 341 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 APOLD1Q96LR9 279 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 TRIB3Q96RU7 358 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 TBX15Q96SF7 602 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 IMMP2LQ96T52 175 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 RNF126Q9BV68 326 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 MRIQ9BWK5 157 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ELL3Q9HB65 397 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR2S2Q9NQN1 319 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC35D1Q9NTN3 355 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 P4HTMQ9NXG6 502 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF107Q9UII5 783 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC45A2Q9UMX9 530 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 URGCP-MRPS24S4R325 110 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 DAPL1A0PJW8 107 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF320A2RRD8 509 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF705FA8MVS1 300 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 B5MCH6 92 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CLDN34H7C241 214 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CORTO00230 105 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 STC2O76061 302 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 C1QTNF9P0C862 333 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF705DP0CH99 300 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF705BP0CI00 300 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR13C7P0DN81 318 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PTNP21246 168 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF10P21506 573 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CDK3Q00526 305 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 GGTA1PQ4G0N0 100 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NOXRED1Q6NXP6 359 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NIPAL3Q6P499 406 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 RPL22L1Q6P5R6 122 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OPN5Q6U736 354 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SMIM5Q71RC9 77 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 MED25Q71SY5 747 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FCRLAQ7L513 359 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 COMMD6Q7Z4G1 85 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC25A42Q86VD7 318 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 TGIF2LYQ8IUE0 185 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF615Q8N8J6 731 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 STXBP6Q8NFX7 210 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR4D6Q8NGJ1 314 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF596Q8TC21 504 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CXorf40AQ8TE69 158 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CLEC4CQ8WTT0 213 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ADIPOR1Q96A54 375 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 HPDLQ96IR7 371 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 HIST1H2AAQ96QV6 131 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NIPSNAP3BQ9BS92 247 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 GPR52Q9Y2T5 361 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ANTXRLA6NF34 631 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 VSTM2BA6NLU5 285 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 HSPB2A8KAH6 182 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 YDJCA8MPS7 323 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 RNASET2O00584 256 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 FFAR2O15552 330 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 HBP1O60381 514 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 B3GAT3O94766 335 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 CSTBP04080 98 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 DANCRP0C864 163 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 AMD1P17707 334 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 IMPA1P29218 277 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 OPRD1P41143 372 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 CLRN1P58418 232 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 COL10A1Q03692 680 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 PNRC1Q12796 327 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 HSPB2Q16082 182 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 PGGHGQ32M88 737 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 ACOT6Q3I5F7 207 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 SNAI3Q3KNW1 292 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 RPUSD3Q6P087 351 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 LEG1Q6P5S2 330 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 TMEM205Q6UW68 189 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF280BQ86YH2 543 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 Q8N3U1 123 aa4.53□□□□□ -1.68
TMEM39A-206ENST00000473684 CLEC1AQ8NC01 280 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms