RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SLC35G6P0C7Q6 338 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 CXCR1P25024 350 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 LOXP28300 417 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 ATP6V1FQ16864 119 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 HNRNPA1L2Q32P51 320 aaKnown RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 SLC25A35Q3KQZ1 300 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 NEGR1Q7Z3B1 354 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 SLC30A8Q8IWU4 369 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 OR13G1Q8NGZ3 307 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 RTN4IP1Q8WWV3 396 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 MRPL48Q96GC5 212 aaKnown RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 C18orf15Q96N68 181 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 TSNAXQ99598 290 aaKnown RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 TIMM29Q9BSF4 260 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 RSPO3Q9BXY4 272 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 HEBP1Q9NRV9 189 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 CFL2Q9Y281 166 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 KPTNQ9Y664 436 aa2.53□□□□□ -2
CDC42BPA-211ENST00000466538 BZW2Q9Y6E2 419 aaKnown RBP2.53□□□□□ -2
CDC42BPA-211ENST00000466538 IGLV2-18A0A075B6J9 118 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 IGHV3-49A0A0A0MS15 119 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 IGHV2OR16-5A0A0B4J2B6 119 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 H7C2Y5 167 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 KDELR3O43731 214 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SERPINB7O75635 380 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 TRAPPC6AO75865 159 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SCO1O75880 301 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 CYB5R3P00387 301 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF806P0C7X5 589 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 CD9P21926 228 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 PSMB5P28074 263 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 PRLHRP49683 370 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 PAFAH1B2P68402 229 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SLC35A1P78382 337 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SLC35B1P78383 322 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 PITPNAQ00169 270 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 INCA1Q0VD86 236 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 MOBPQ13875 183 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 PRSS8Q16651 343 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 UNQ9165/PRO28630Q6UXU0 137 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 Q6ZSR6 202 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SLC7A5P1Q8MH63 180 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 FAM58AQ8N1B3 248 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 DRAM1Q8N682 238 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR13C9Q8NGT0 318 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 TFGQ92734 400 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 GHSRQ92847 366 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 CDS1Q92903 461 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 FAM131CQ96AQ9 280 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 TMIGD2Q96BF3 282 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SNF8Q96H20 258 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 KCNS1Q96KK3 526 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 NAPGQ99747 312 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 C21orf62Q9NYP8 219 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 SIGLEC7Q9Y286 467 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 CABIN1Q9Y6J0 2220 aa2.52□□□□□ -2.01
CDC42BPA-211ENST00000466538 CENPBD1B2RD01 187 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 PLEKHA8P1O95397 391 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 GCGP01275 180 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF286BP0CG31 522 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 HSPD1P10809 573 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 MTPNP58546 118 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 C6orf99Q4VX62 202 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 CPTPQ5TA50 214 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 TMEM236Q5W0B7 351 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ASCL4Q6XD76 172 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF615Q8N8J6 731 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF709Q8N972 641 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR5T1Q8NG75 326 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZFAND1Q8TCF1 268 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 TMEM234Q8WY98 164 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 CENPNQ96H22 339 aaPredicted RBP2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 TM6SF2Q9BZW4 377 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ARV1Q9H2C2 271 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR51B5Q9H339 312 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 C6orf50Q9HD87 102 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 RBFOX1Q9NWB1 397 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF835Q9Y2P0 537 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 NOSIPQ9Y314 301 aaKnown RBP2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 S4R3C0 116 aa2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF608Q9ULD9 1512 aaPredicted RBP2.51□□□□□ -2.01
CDC42BPA-211ENST00000466538 BRCA1P38398 1863 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 DOCK9Q9BZ29 2069 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 IGHV1-3A0A0C4DH29 117 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 ANKRD20A5PA0PJZ0 165 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 COLCA2A8K830 154 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 M0R1X1 148 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 GMDSO60547 372 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 CSTAP01040 98 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 MMP7P09237 267 aaPredicted RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 CCDC172P0C7W6 258 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 PTNP21246 168 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 HCCSP53701 268 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 CARD18P57730 90 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF616Q08AN1 781 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 VAMP3Q15836 100 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 KRTAP13-3Q3SY46 172 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 THOC7Q6I9Y2 204 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 HMGN2P46Q86SG4 172 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms