RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 GPR3P46089 330 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 BATFQ16520 125 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 OR13C8Q8NGS7 320 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 NUBPLQ8TB37 319 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A31Q9H0C2 315 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 PLK3Q9H4B4 646 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 C12orf10Q9HB07 376 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 NECAP2Q9NVZ3 263 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 PILRAQ9UKJ1 303 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 OR5H15A6NDH6 313 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 ALG1L2C9J202 215 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 HLA-HP01893 362 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 SERPINA7P05543 415 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 GLB1P16278 677 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 CCR5P51681 352 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 PCBD1P61457 104 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 KISS1Q15726 138 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 CD200R1LQ6Q8B3 271 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
HPS4-208ENST00000464362 FAAP24Q9BTP7 215 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 AICDAQ9GZX7 198 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 BCO1Q9HAY6 547 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 RHOFQ9HBH0 211 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 ANKRD36A6QL64 1941 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 NRASP01111 189 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 VSIG10L2P0DP72 767 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
HPS4-208ENST00000464362 EIF2S3P41091 472 aaKnown RBP8.1□□□□□ -1.11
HPS4-208ENST00000464362 KIAA0141Q14154 515 aaPredicted RBP8.1□□□□□ -1.11
HPS4-208ENST00000464362 GUSBP11Q6P575 273 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 TRILQ7L0X0 811 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 DPPA2Q7Z7J5 298 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 NR2C2APQ86WQ0 139 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 MVB12AQ96EY5 273 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 PIGQQ9BRB3 760 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 DUSP13Q9UII6 198 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 GPR160Q9UJ42 338 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 CREBBPQ92793 2442 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 IGHV1OR21-1A0A087WYE8 117 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 C9orf170A2RU37 121 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 A6NCN8 305 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 H7C1Q1 480 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 PIAS2O75928 621 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 RECKO95980 971 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 HPNP05981 417 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 PNLIPP16233 465 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 GABRA2P47869 451 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 RRADP55042 308 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 FLI1Q01543 452 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 EDDM3AQ14507 147 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 SHBQ15464 509 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 INPP5JQ15735 1006 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 EIF2S3LQ2VIR3 472 aaKnown RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 ELFN2Q5R3F8 820 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ASB5Q8WWX0 329 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 EMG1Q92979 244 aaKnown RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A38Q96DW6 304 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 REEP6Q96HR9 211 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 SLCO1B1Q9Y6L6 691 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 WDR81Q562E7 1941 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 A0A087WV48 116 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 PLPP3O14495 311 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 LMX1BO60663 402 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 NXPH2O95156 264 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 CD37P11049 281 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 DAOP14920 347 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 IL11P20809 199 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 CEACAM16Q2WEN9 425 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 SPATA46Q5T0L3 261 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A43Q8WUT9 341 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 C2orf50Q96LR7 162 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNF275Q9NSD4 429 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 MMP24Q9Y5R2 645 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ATRXP46100 2492 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 C5orf49A4QMS7 147 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNF705FA8MVS1 300 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNF705DP0CH99 300 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNF705BP0CI00 300 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 ERGP11308 486 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZP3P21754 424 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 CYB561P49447 251 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 SYT13Q7L8C5 426 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNF808Q8N4W9 903 aaPredicted RBP8.09□□□□□ -1.11
HPS4-208ENST00000464362 NANPQ8TBE9 248 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNRF4Q8WWF5 429 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 OXGR1Q96P68 337 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 NIPSNAP3BQ9BS92 247 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 CRLF2Q9HC73 371 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 GNG13Q9P2W3 67 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 DOCK4Q8N1I0 1966 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 ZNF236Q9UL36 1845 aa8.09□□□□□ -1.11
HPS4-208ENST00000464362 PNPP00491 289 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 IAPPP10997 89 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 CCL2P13500 99 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms